Variant report

Variant	rs73059573
Chromosome Location	chr1:184289429-184289430
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs12128914	0.92[ASN][1000 genomes]
rs16822766	0.83[ASN][1000 genomes]
rs16822848	0.86[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs4288562	0.95[EUR][1000 genomes]
rs4622032	0.92[ASN][1000 genomes]
rs4651198	0.95[EUR][1000 genomes]
rs57904419	0.89[EUR][1000 genomes]
rs58386684	0.89[EUR][1000 genomes]
rs60179616	0.87[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs6424946	0.92[ASN][1000 genomes]
rs6669875	0.83[ASN][1000 genomes]
rs73059563	0.87[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs73059572	0.92[ASN][1000 genomes]
rs7516012	0.92[ASN][1000 genomes]
rs7516202	0.95[EUR][1000 genomes]
rs7517860	0.85[EUR][1000 genomes]
rs7530685	0.84[EUR][1000 genomes]
rs7543122	0.84[EUR][1000 genomes]
rs884902	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530079	chr1:183797938-184639971	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
2	nsv528772	chr1:184288820-184290515	Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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