Variant report

Variant	rs73075865
Chromosome Location	chr3:56423659-56423660
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:56423546..56425324-chr3:56452341..56454544,2	K562	blood:

Extended variants
information (count: 65 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:64)

rs_ID	r²[population]
rs1317750	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55968316	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56138618	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56216904	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56227347	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56286622	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56354761	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56383777	1.00[ASN][1000 genomes]
rs56988974	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57708875	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58067804	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58449031	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58720638	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59412382	1.00[ASN][1000 genomes]
rs59923603	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60120946	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60419369	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61092323	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61163420	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61248828	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61524165	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6802166	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73073904	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73073905	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73073910	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73073974	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73073978	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73073985	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73073992	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73075823	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73075825	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73075831	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73075832	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73075858	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73075881	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73075888	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73075891	1.00[ASN][1000 genomes]
rs73075902	1.00[ASN][1000 genomes]
rs73077703	1.00[ASN][1000 genomes]
rs73077704	1.00[ASN][1000 genomes]
rs73077719	1.00[ASN][1000 genomes]
rs73078547	1.00[ASN][1000 genomes]
rs73079872	1.00[ASN][1000 genomes]
rs73082476	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73086422	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73086435	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73086436	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73086437	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73086439	1.00[ASN][1000 genomes]
rs73086440	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73086441	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73086449	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73088517	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73088520	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73088522	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73088532	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73088534	1.00[ASN][1000 genomes]
rs73090547	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73090555	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73090565	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73090570	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73090572	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7615413	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs969242	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876816	chr3:56422771-56457705	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56422400-56427800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr3:56422600-56423800	Enhancers	Placenta Amnion	Placenta Amnion
3	chr3:56423400-56423800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr3:56423400-56424000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr3:56423600-56427400	Weak transcription	Adipose Nuclei	Adipose

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