Variant report
| Variant | rs73079655 |
|---|---|
| Chromosome Location | chr1:197794579-197794580 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr1:197792235..197794878-chr1:197870530..197872568,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000203724 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:30)
| rs_ID | r2[population] |
|---|---|
| rs10082059 | 1.00[AMR][1000 genomes] |
| rs13374542 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28485341 | 1.00[AMR][1000 genomes] |
| rs57594005 | 1.00[AMR][1000 genomes] |
| rs59416760 | 1.00[AMR][1000 genomes] |
| rs6428420 | 1.00[AMR][1000 genomes] |
| rs6686513 | 1.00[AMR][1000 genomes] |
| rs6686735 | 1.00[AMR][1000 genomes] |
| rs6688961 | 1.00[AMR][1000 genomes] |
| rs6694441 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73075682 | 1.00[AMR][1000 genomes] |
| rs73075690 | 1.00[AMR][1000 genomes] |
| rs73075699 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73077604 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73077619 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73077640 | 0.95[AFR][1000 genomes] |
| rs73079634 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73081752 | 1.00[AMR][1000 genomes] |
| rs73081769 | 1.00[AMR][1000 genomes] |
| rs73081781 | 1.00[AMR][1000 genomes] |
| rs73081791 | 1.00[AMR][1000 genomes] |
| rs73081794 | 1.00[AMR][1000 genomes] |
| rs73083805 | 1.00[AMR][1000 genomes] |
| rs7516293 | 1.00[AMR][1000 genomes] |
| rs7519957 | 1.00[AMR][1000 genomes] |
| rs7526273 | 1.00[AMR][1000 genomes] |
| rs7528697 | 1.00[AMR][1000 genomes] |
| rs7539224 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7539656 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7550287 | 1.00[AMR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
