Variant report
| Variant | rs73088697 |
|---|---|
| Chromosome Location | chr4:18326656-18326657 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:25)
| rs_ID | r2[population] |
|---|---|
| rs41409849 | 1.00[AMR][1000 genomes] |
| rs57770817 | 1.00[AMR][1000 genomes] |
| rs59263365 | 1.00[AMR][1000 genomes] |
| rs60019821 | 1.00[AMR][1000 genomes] |
| rs73088680 | 1.00[AMR][1000 genomes] |
| rs73088683 | 1.00[AMR][1000 genomes] |
| rs73092597 | 1.00[AMR][1000 genomes] |
| rs73094303 | 1.00[AMR][1000 genomes] |
| rs73094304 | 1.00[AMR][1000 genomes] |
| rs73094306 | 1.00[AMR][1000 genomes] |
| rs73094314 | 1.00[AMR][1000 genomes] |
| rs73094315 | 1.00[AMR][1000 genomes] |
| rs73094326 | 1.00[AMR][1000 genomes] |
| rs73094330 | 1.00[AMR][1000 genomes] |
| rs73094333 | 1.00[AMR][1000 genomes] |
| rs73094335 | 1.00[AMR][1000 genomes] |
| rs73094353 | 1.00[AMR][1000 genomes] |
| rs73094357 | 1.00[AMR][1000 genomes] |
| rs73096366 | 1.00[AMR][1000 genomes] |
| rs73096394 | 1.00[AMR][1000 genomes] |
| rs73096396 | 1.00[AMR][1000 genomes] |
| rs73096400 | 1.00[AMR][1000 genomes] |
| rs73098304 | 1.00[AMR][1000 genomes] |
| rs73098305 | 1.00[AMR][1000 genomes] |
| rs73098307 | 1.00[AMR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv1003931 | chr4:18241575-18849898 | Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:18323600-18327400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
