Variant report

Variant	rs73090736
Chromosome Location	chr3:59617593-59617594
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs13064070	1.00[ASN][1000 genomes]
rs2605433	1.00[ASN][1000 genomes]
rs34613319	1.00[ASN][1000 genomes]
rs35236406	1.00[ASN][1000 genomes]
rs55633978	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60174430	1.00[ASN][1000 genomes]
rs66463812	1.00[ASN][1000 genomes]
rs67272311	1.00[ASN][1000 genomes]
rs67804975	1.00[ASN][1000 genomes]
rs73090753	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73090782	1.00[ASN][1000 genomes]
rs9835405	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876836	chr3:59500394-59664687	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv834706	chr3:59538151-59736014	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Active TSS Genic enhancers	Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
3	nsv998711	chr3:59542279-59704503	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:59616000-59617800	Enhancers	Primary neutrophils fromperipheralblood	blood
2	chr3:59617200-59617600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr3:59617200-59617600	Enhancers	Right Ventricle	heart
4	chr3:59617400-59617600	Enhancers	Fetal Heart	heart
5	chr3:59617400-59619600	Enhancers	Fetal Muscle Trunk	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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