The 2.0 version of rSNPBase

Variant report

Variant rs73096357
Chromosome Location chr1:227439435-227439436
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:227414000-227459200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:227414200-227453800 Weak transcription HSMM muscle
3 chr1:227415800-227456800 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr1:227424800-227440800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr1:227425400-227445200 Weak transcription Osteobl bone
6 chr1:227431600-227486200 Weak transcription NHDF-Ad bronchial
7 chr1:227431800-227443000 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr1:227432000-227459200 Weak transcription Fetal Lung lung
9 chr1:227432200-227455400 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:227432600-227448000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:227432800-227441600 Weak transcription Brain Angular Gyrus brain
12 chr1:227432800-227442400 Weak transcription K562 blood
13 chr1:227432800-227446000 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr1:227432800-227455600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr1:227433000-227441600 Weak transcription A549 lung
16 chr1:227433000-227446000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr1:227433000-227446000 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr1:227433000-227469000 Weak transcription Aorta Aorta
19 chr1:227433200-227452800 Weak transcription Ovary ovary
20 chr1:227434000-227442200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr1:227434000-227444200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr1:227434000-227446800 Weak transcription Brain Inferior Temporal Lobe brain
23 chr1:227434000-227447000 Weak transcription Brain Hippocampus Middle brain
24 chr1:227434000-227453400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:227434200-227440200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:227434200-227440600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:227434200-227442800 Weak transcription Fetal Stomach stomach
28 chr1:227434200-227455400 Weak transcription Left Ventricle heart
29 chr1:227434200-227455400 Weak transcription Right Ventricle heart
30 chr1:227434200-227455800 Weak transcription Adipose Nuclei Adipose
31 chr1:227434400-227442800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:227434400-227443400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:227434400-227446000 Weak transcription Brain Substantia Nigra brain
34 chr1:227434600-227468800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr1:227434800-227443000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:227434800-227458400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr1:227435000-227457000 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr1:227435600-227453600 Weak transcription Fetal Intestine Small intestine
39 chr1:227436800-227440600 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr1:227437800-227441200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:227437800-227443400 Weak transcription Fetal Brain Female brain
42 chr1:227438800-227448000 Weak transcription Psoas Muscle Psoas
43 chr1:227438800-227449400 Weak transcription Right Atrium heart
44 chr1:227439400-227440200 Enhancers HUVEC blood vessel

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Last update: Aug 31, 2015