Variant report

Variant	rs73100935
Chromosome Location	chr12:44314454-44314455
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:44158810..44161321-chr12:44313514..44316274,2	K562	blood:
2	chr12:44310016..44313786-chr12:44314229..44318943,4	K562	blood:

Extended variants
information (count: 60 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs10506232	0.84[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10748379	0.87[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10748380	0.87[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10785470	0.90[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10785471	0.90[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10785472	0.88[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10785473	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10785474	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10785476	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10785477	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10785478	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10785479	0.86[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10785481	0.89[ASN][1000 genomes]
rs10785482	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10880586	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10880587	0.90[ASN][1000 genomes]
rs10880588	0.87[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10880589	0.90[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10880591	0.90[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10880597	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10880598	0.80[AFR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10880599	0.81[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs10880600	0.87[ASN][1000 genomes]
rs10880601	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10880604	0.87[ASN][1000 genomes]
rs10880605	0.86[ASN][1000 genomes]
rs11182327	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11182329	0.90[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11182337	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11182339	0.87[ASN][1000 genomes]
rs11182341	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11182346	0.87[ASN][1000 genomes]
rs11182358	0.84[ASN][1000 genomes]
rs12305959	0.81[AFR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12369569	0.90[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1881926	0.90[ASN][1000 genomes]
rs1881927	0.90[ASN][1000 genomes]
rs2031056	0.90[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3925072	0.86[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs3925073	0.84[AFR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4238093	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4417371	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4768055	0.90[ASN][1000 genomes]
rs4768057	0.84[ASN][1000 genomes]
rs4768546	0.87[ASN][1000 genomes]
rs5023324	0.87[ASN][1000 genomes]
rs6582490	0.87[ASN][1000 genomes]
rs73100931	0.90[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73100975	0.81[AFR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7311847	0.90[ASN][1000 genomes]
rs7312373	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7956825	0.90[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7957074	0.90[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7964465	0.90[AFR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7965873	0.87[ASN][1000 genomes]
rs7971487	0.90[AFR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7971628	0.87[ASN][1000 genomes]
rs7974214	0.90[ASN][1000 genomes]
rs7974501	0.90[AFR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv526719	chr12:44298417-44315762	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:44307000-44315600	Weak transcription	NHDF-Ad	bronchial
2	chr12:44307400-44324000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr12:44308400-44318400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr12:44308600-44314800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr12:44311400-44324600	Weak transcription	Left Ventricle	heart
6	chr12:44312600-44315200	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr12:44314400-44314800	Enhancers	Fetal Heart	heart

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