The 2.0 version of rSNPBase

Variant report

Variant rs73120297
Chromosome Location chr1:223405483-223405484
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:223390400-223406400 Weak transcription Gastric stomach
2 chr1:223393200-223407800 Weak transcription Brain Anterior Caudate brain
3 chr1:223394600-223406800 Weak transcription Pancreas Pancrea
4 chr1:223396600-223408200 Weak transcription Brain Angular Gyrus brain
5 chr1:223399800-223406800 Weak transcription Esophagus oesophagus
6 chr1:223400800-223408800 Enhancers Fetal Thymus thymus
7 chr1:223401800-223406800 Weak transcription Ovary ovary
8 chr1:223401800-223408400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
9 chr1:223401800-223408400 Enhancers Primary T killer naive cells fromperipheralblood blood
10 chr1:223401800-223408400 Enhancers Primary T killer memory cells from peripheral blood blood
11 chr1:223402000-223408400 Enhancers Primary T helper cells fromperipheralblood blood
12 chr1:223402200-223408400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
13 chr1:223402400-223406000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
14 chr1:223402400-223407800 Enhancers Primary T regulatory cells fromperipheralblood blood
15 chr1:223402400-223408400 Enhancers Thymus Thymus
16 chr1:223402600-223407600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr1:223402600-223408400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr1:223402800-223408400 Enhancers Primary T cells fromperipheralblood blood
19 chr1:223402800-223408400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:223403000-223408000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:223403600-223406200 Weak transcription Placenta Amnion Placenta Amnion
22 chr1:223404000-223408400 Enhancers Primary T helper naive cells from peripheral blood blood
23 chr1:223404200-223406800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:223404200-223408200 Enhancers HMEC breast
25 chr1:223404200-223408400 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr1:223404200-223408800 Enhancers Primary T cells from cord blood blood
27 chr1:223404400-223407000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:223404400-223408400 Enhancers Primary T helper cells PMA-I stimulated --
29 chr1:223404600-223405800 Enhancers Muscle Satellite Cultured Cells --
30 chr1:223404600-223406400 Weak transcription HSMMtube muscle
31 chr1:223404600-223406600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:223404600-223406800 Weak transcription NHDF-Ad bronchial
33 chr1:223404800-223405600 Weak transcription HSMM muscle
34 chr1:223404800-223406000 Weak transcription NHEK skin
35 chr1:223404800-223406400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr1:223404800-223406400 Weak transcription NHLF lung
37 chr1:223404800-223406600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:223405000-223406000 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr1:223405000-223406400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:223405200-223405600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:223405200-223405600 Weak transcription NH-A brain
42 chr1:223405200-223406200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr1:223405200-223406200 Weak transcription Osteobl bone
44 chr1:223405200-223406400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:223405200-223406400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:223405200-223406400 Enhancers K562 blood
47 chr1:223405400-223405800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr1:223405400-223407400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015