Variant report
| Variant | rs73141949 |
|---|---|
| Chromosome Location | chr5:94767831-94767832 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000153347 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:10)
| rs_ID | r2[population] |
|---|---|
| rs10064488 | 1.00[ASN][1000 genomes] |
| rs11953259 | 1.00[ASN][1000 genomes] |
| rs17084856 | 1.00[ASN][1000 genomes] |
| rs17084871 | 1.00[ASN][1000 genomes] |
| rs17084888 | 1.00[AMR][1000 genomes] |
| rs73145988 | 1.00[ASN][1000 genomes] |
| rs73147912 | 1.00[ASN][1000 genomes] |
| rs73147928 | 1.00[ASN][1000 genomes] |
| rs73147942 | 1.00[ASN][1000 genomes] |
| rs7703196 | 1.00[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv882388 | chr5:94764006-94925849 | Weak transcription Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
