Variant report

Variant	rs73157578
Chromosome Location	chr7:98814108-98814109
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11973529	0.93[EUR][1000 genomes]
rs11980143	0.86[EUR][1000 genomes]
rs55761861	0.86[EUR][1000 genomes]
rs57786744	0.86[EUR][1000 genomes]
rs60127638	0.89[EUR][1000 genomes]
rs67279166	0.83[EUR][1000 genomes]
rs67309224	0.83[EUR][1000 genomes]
rs73157580	0.89[EUR][1000 genomes]
rs73157581	0.89[EUR][1000 genomes]
rs73157582	0.89[EUR][1000 genomes]
rs73157584	0.89[EUR][1000 genomes]
rs73157585	0.89[EUR][1000 genomes]
rs73157587	0.86[EUR][1000 genomes]
rs73157588	0.86[EUR][1000 genomes]
rs73157589	0.89[EUR][1000 genomes]
rs73157590	0.89[EUR][1000 genomes]
rs73157596	0.93[EUR][1000 genomes]
rs868391	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3433144	chr7:98777878-99060209	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:98802600-98823400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr7:98810600-98816000	Weak transcription	A549	lung
3	chr7:98810800-98814200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
4	chr7:98811000-98827600	Weak transcription	Right Atrium	heart
5	chr7:98811400-98816000	Weak transcription	Fetal Intestine Large	intestine
6	chr7:98811400-98816000	Weak transcription	Fetal Intestine Small	intestine
7	chr7:98813400-98815600	Weak transcription	Primary T cells from cord blood	blood
8	chr7:98813800-98815000	Weak transcription	Placenta	Placenta
9	chr7:98814000-98816000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
10	chr7:98814000-98817400	Enhancers	Stomach Mucosa	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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