Variant report

No.	Distal block	Cell Line	Cell type
1	chr7:98741779..98743305-chr7:98813050..98816035,2	MCF-7	breast:
2	chr7:98807183..98812417-chr7:98813436..98818450,10	MCF-7	breast:
3	chr7:98740861..98742854-chr7:98813046..98815580,2	MCF-7	breast:
4	chr7:98808636..98811320-chr7:98812026..98815181,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000198742	Chromatin interaction

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11980143	0.93[EUR][1000 genomes]
rs55761861	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs57786744	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs60127638	0.97[EUR][1000 genomes]
rs67279166	0.90[EUR][1000 genomes]
rs67309224	0.90[EUR][1000 genomes]
rs67860332	0.83[EUR][1000 genomes]
rs73157575	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs73157578	0.93[EUR][1000 genomes]
rs73157580	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73157581	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73157582	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73157584	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73157585	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73157587	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73157588	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73157589	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73157590	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73157596	0.86[EUR][1000 genomes]
rs73157601	0.80[EUR][1000 genomes]
rs73157602	0.80[EUR][1000 genomes]
rs868391	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3433144	chr7:98777878-99060209	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	62 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:98802600-98823400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr7:98810600-98816000	Weak transcription	A549	lung
3	chr7:98811000-98827600	Weak transcription	Right Atrium	heart
4	chr7:98811400-98816000	Weak transcription	Fetal Intestine Large	intestine
5	chr7:98811400-98816000	Weak transcription	Fetal Intestine Small	intestine
6	chr7:98813400-98815600	Weak transcription	Primary T cells from cord blood	blood
7	chr7:98813800-98815000	Weak transcription	Placenta	Placenta
8	chr7:98814000-98816000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
9	chr7:98814000-98817400	Enhancers	Stomach Mucosa	stomach
10	chr7:98814200-98815600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood

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