Variant report

Variant	rs73159170
Chromosome Location	chr3:146377876-146377877
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs1124628	1.00[ASN][1000 genomes]
rs1553628	1.00[ASN][1000 genomes]
rs1606175	1.00[ASN][1000 genomes]
rs16858692	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs16858892	1.00[ASN][1000 genomes]
rs16858913	1.00[ASN][1000 genomes]
rs17371950	1.00[ASN][1000 genomes]
rs17752579	1.00[ASN][1000 genomes]
rs1991716	1.00[ASN][1000 genomes]
rs55761292	0.93[EUR][1000 genomes]
rs73157001	0.91[EUR][1000 genomes]
rs73159104	0.91[EUR][1000 genomes]
rs73159118	0.91[EUR][1000 genomes]
rs73159142	0.93[EUR][1000 genomes]
rs73159157	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73159160	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73159165	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73159193	1.00[ASN][1000 genomes]
rs73159198	1.00[ASN][1000 genomes]
rs73160903	1.00[ASN][1000 genomes]
rs73160904	1.00[ASN][1000 genomes]
rs73160905	1.00[ASN][1000 genomes]
rs73160906	1.00[ASN][1000 genomes]
rs73160909	1.00[ASN][1000 genomes]
rs73160912	1.00[ASN][1000 genomes]
rs73160972	1.00[ASN][1000 genomes]
rs73160973	1.00[ASN][1000 genomes]
rs73160976	1.00[ASN][1000 genomes]
rs73160977	1.00[ASN][1000 genomes]
rs73160981	1.00[ASN][1000 genomes]
rs73160985	1.00[ASN][1000 genomes]
rs73160988	1.00[ASN][1000 genomes]
rs73162818	1.00[ASN][1000 genomes]
rs73162823	1.00[ASN][1000 genomes]
rs73162833	1.00[ASN][1000 genomes]
rs9289721	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv516386	chr3:146366513-146758405	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv4047	chr3:146368154-146401858	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3369526	chr3:146374303-146400737	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
4	nsv591937	chr3:146375764-146390316	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:146377600-146378600	Enhancers	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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