Variant report

Variant	rs73198230
Chromosome Location	chr12:87719786-87719787
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10219727	1.00[EUR][1000 genomes]
rs11104427	1.00[EUR][1000 genomes]
rs55688156	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55717936	1.00[EUR][1000 genomes]
rs66494542	1.00[EUR][1000 genomes]
rs66553127	1.00[EUR][1000 genomes]
rs67472304	1.00[EUR][1000 genomes]
rs67554775	0.92[EUR][1000 genomes]
rs7296885	0.92[EUR][1000 genomes]
rs73194376	0.87[EUR][1000 genomes]
rs73194379	0.87[EUR][1000 genomes]
rs73194393	0.92[EUR][1000 genomes]
rs73196305	0.92[EUR][1000 genomes]
rs73196309	0.92[EUR][1000 genomes]
rs73196310	0.92[EUR][1000 genomes]
rs73196312	0.92[EUR][1000 genomes]
rs73196332	0.92[EUR][1000 genomes]
rs73196334	0.92[EUR][1000 genomes]
rs73196336	0.92[EUR][1000 genomes]
rs73196341	0.92[EUR][1000 genomes]
rs73196349	0.92[EUR][1000 genomes]
rs73196352	0.92[EUR][1000 genomes]
rs73198215	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427918	chr12:87647585-87786660	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:87717400-87723000	Weak transcription	Fetal Heart	heart
2	chr12:87718400-87723000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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