Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10247904	1.00[ASN][1000 genomes]
rs11773233	1.00[ASN][1000 genomes]
rs12536063	1.00[ASN][1000 genomes]
rs12538303	1.00[ASN][1000 genomes]
rs1443754	1.00[ASN][1000 genomes]
rs17369598	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17462732	1.00[ASN][1000 genomes]
rs56346012	1.00[ASN][1000 genomes]
rs62473066	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62474590	1.00[ASN][1000 genomes]
rs62474591	1.00[ASN][1000 genomes]
rs6943903	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs702419	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs702420	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73216104	1.00[ASN][1000 genomes]
rs7778318	1.00[ASN][1000 genomes]
rs7785641	1.00[ASN][1000 genomes]
rs7794283	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7801104	1.00[ASN][1000 genomes]
rs7803157	1.00[ASN][1000 genomes]
rs798680	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs798682	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs798684	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs798685	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv5931	chr7:121944137-121988594	Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1017029	chr7:121958574-122338623	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:121957400-121962400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr7:121957400-121962400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr7:121957400-121977600	Weak transcription	Gastric	stomach
4	chr7:121957400-121990800	Weak transcription	Pancreas	Pancrea
5	chr7:121957400-122051200	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr7:121958800-121994400	Weak transcription	Lung	lung
7	chr7:121961200-121980400	Weak transcription	Left Ventricle	heart

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