Variant report

Variant	rs73214548
Chromosome Location	chr4:62120724-62120725
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs1505663	0.91[ASN][1000 genomes]
rs1505667	0.97[ASN][1000 genomes]
rs1505673	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1979111	0.97[ASN][1000 genomes]
rs2167076	0.97[ASN][1000 genomes]
rs57800374	0.90[ASN][1000 genomes]
rs60024238	0.97[ASN][1000 genomes]
rs66717947	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs67253259	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs67710116	0.89[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73214533	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73214542	0.92[ASN][1000 genomes]
rs7681067	0.91[ASN][1000 genomes]
rs7685833	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9685980	0.91[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:62111400-62129400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr4:62112000-62120800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr4:62112200-62124000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr4:62116000-62127000	Weak transcription	Brain Cingulate Gyrus	brain
5	chr4:62116400-62121400	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr4:62118400-62120800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr4:62118600-62120800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr4:62118600-62120800	Enhancers	HMEC	breast
9	chr4:62118600-62120800	Enhancers	NHEK	skin
10	chr4:62118600-62121000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr4:62119200-62121400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr4:62119800-62127400	Weak transcription	Brain Inferior Temporal Lobe	brain
13	chr4:62120600-62121600	Weak transcription	Brain Angular Gyrus	brain
14	chr4:62120600-62126000	Weak transcription	Brain Substantia Nigra	brain
15	chr4:62120600-62126600	Weak transcription	Brain Anterior Caudate	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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