Variant report

Variant	rs2167076
Chromosome Location	chr4:62113227-62113228
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1394946	0.83[CHB][hapmap];0.81[JPT][hapmap]
rs1505663	0.82[CHB][hapmap];0.86[JPT][hapmap];0.89[ASN][1000 genomes]
rs1505667	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1505673	1.00[ASN][1000 genomes]
rs1979111	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.95[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57800374	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60024238	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66717947	0.96[ASN][1000 genomes]
rs67253259	0.96[ASN][1000 genomes]
rs67710116	0.96[ASN][1000 genomes]
rs6835742	0.86[JPT][hapmap]
rs73214533	0.89[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs73214542	0.92[ASN][1000 genomes]
rs73214548	0.97[ASN][1000 genomes]
rs7681067	0.89[ASN][1000 genomes]
rs7685833	0.93[ASN][1000 genomes]
rs9312075	0.82[CHB][hapmap];0.86[JPT][hapmap]
rs954855	0.81[JPT][hapmap]
rs9685980	0.89[ASN][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:62111000-62113800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:62111400-62114000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr4:62111400-62120000	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr4:62111400-62129400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr4:62112000-62115200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr4:62112000-62116800	Weak transcription	Fetal Muscle Leg	muscle
7	chr4:62112000-62120800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr4:62112200-62114200	Weak transcription	Brain Hippocampus Middle	brain
9	chr4:62112200-62114600	Weak transcription	Brain Cingulate Gyrus	brain
10	chr4:62112200-62114800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
11	chr4:62112200-62115200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr4:62112200-62115600	Weak transcription	HUES48 Cell Line	embryonic stem cell
13	chr4:62112200-62118400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
14	chr4:62112200-62124000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr4:62112800-62116000	Enhancers	Brain Substantia Nigra	brain
16	chr4:62112800-62119200	Weak transcription	HUES64 Cell Line	embryonic stem cell
17	chr4:62113200-62113400	Enhancers	Fetal Lung	lung
18	chr4:62113200-62114400	Enhancers	Brain Anterior Caudate	brain
19	chr4:62113200-62114400	Enhancers	Brain Inferior Temporal Lobe	brain
20	chr4:62113200-62115000	Weak transcription	Brain Angular Gyrus	brain

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