Variant report

Variant	rs73244294
Chromosome Location	chr4:20097493-20097494
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1185160	0.86[ASN][1000 genomes]
rs1344851	0.86[ASN][1000 genomes]
rs1344852	0.86[ASN][1000 genomes]
rs1369891	0.86[ASN][1000 genomes]
rs1561124	0.86[ASN][1000 genomes]
rs2322346	0.86[ASN][1000 genomes]
rs2575080	0.86[ASN][1000 genomes]
rs3906730	0.86[ASN][1000 genomes]
rs4560407	0.86[ASN][1000 genomes]
rs4572880	0.86[ASN][1000 genomes]
rs517903	0.86[ASN][1000 genomes]
rs532059	0.86[ASN][1000 genomes]
rs571400	0.86[ASN][1000 genomes]
rs587668	0.86[ASN][1000 genomes]
rs593770	0.86[ASN][1000 genomes]
rs601699	0.86[ASN][1000 genomes]
rs606761	0.86[ASN][1000 genomes]
rs608951	0.86[ASN][1000 genomes]
rs613798	0.86[ASN][1000 genomes]
rs677198	0.86[ASN][1000 genomes]
rs685064	0.86[ASN][1000 genomes]
rs934630	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529290	chr4:19658583-20173839	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv593790	chr4:19740879-20142039	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv2752044	chr4:19788263-20126804	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:20097400-20099000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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