Variant report

Variant	rs73262446
Chromosome Location	chr5:147710483-147710484
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs57349530	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57994439	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58789597	1.00[AMR][1000 genomes]
rs59743971	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60374416	1.00[AMR][1000 genomes]
rs6860022	1.00[AMR][1000 genomes]
rs6878613	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6887886	1.00[AMR][1000 genomes]
rs73262428	1.00[AMR][1000 genomes]
rs73262474	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73262478	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73262490	1.00[AMR][1000 genomes]
rs73262496	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73262500	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73262502	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73264508	1.00[AMR][1000 genomes]
rs73264541	1.00[AMR][1000 genomes]
rs73264549	1.00[AMR][1000 genomes]
rs73264589	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73264591	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73264599	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73266453	0.85[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv883015	chr5:147404281-147751035	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
2	nsv599945	chr5:147649181-147720487	Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers Active TSS Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:147709400-147749200	Weak transcription	Psoas Muscle	Psoas
2	chr5:147710000-147711200	Weak transcription	Fetal Heart	heart
3	chr5:147710400-147710600	ZNF genes & repeats	Aorta	Aorta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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