The 2.0 version of rSNPBase

Variant report

Variant rs60374416
Chromosome Location chr5:147760803-147760804
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:147729200-147762200 Weak transcription Aorta Aorta
2 chr5:147747800-147762400 Weak transcription Ovary ovary
3 chr5:147749800-147762200 Weak transcription Adipose Nuclei Adipose
4 chr5:147750000-147762400 Weak transcription Brain Substantia Nigra brain
5 chr5:147751200-147761800 Weak transcription Fetal Brain Male brain
6 chr5:147751400-147763000 Weak transcription Esophagus oesophagus
7 chr5:147751800-147762400 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr5:147752600-147761000 Weak transcription Brain Germinal Matrix brain
9 chr5:147752600-147762200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr5:147752600-147762600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr5:147752800-147762600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr5:147752800-147762800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr5:147753200-147762200 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr5:147754400-147762200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr5:147754400-147762200 Weak transcription Brain Cingulate Gyrus brain
16 chr5:147754400-147762400 Weak transcription iPS-18 Cell Line embryonic stem cell
17 chr5:147754600-147762400 Weak transcription Stomach Mucosa stomach
18 chr5:147754800-147762400 Weak transcription Fetal Intestine Large intestine
19 chr5:147755000-147762000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr5:147755000-147762200 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr5:147755400-147762000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr5:147755400-147762400 Weak transcription Fetal Stomach stomach
23 chr5:147755400-147762400 Weak transcription Stomach Smooth Muscle stomach
24 chr5:147755400-147762600 Weak transcription Fetal Muscle Trunk muscle
25 chr5:147755600-147761600 Weak transcription Right Atrium heart
26 chr5:147755600-147762400 Weak transcription Pancreas Pancrea
27 chr5:147755600-147763000 Weak transcription Lung lung
28 chr5:147755800-147762400 Weak transcription Fetal Muscle Leg muscle
29 chr5:147756000-147762600 Weak transcription Right Ventricle heart
30 chr5:147756200-147762200 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr5:147756600-147762800 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr5:147757000-147763200 Weak transcription Gastric stomach
33 chr5:147757400-147762000 Enhancers HUVEC blood vessel
34 chr5:147757800-147761000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr5:147757800-147762400 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr5:147758200-147761000 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr5:147758200-147761600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr5:147758200-147761600 Weak transcription Brain Inferior Temporal Lobe brain
39 chr5:147758200-147762000 Weak transcription Liver Liver
40 chr5:147758400-147761000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr5:147758400-147761200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr5:147758400-147762200 Weak transcription Brain Anterior Caudate brain
43 chr5:147758400-147762200 Weak transcription Brain Hippocampus Middle brain
44 chr5:147758400-147762400 Weak transcription Duodenum Mucosa Duodenum
45 chr5:147758600-147762200 Weak transcription Primary B cells from cord blood blood
46 chr5:147758600-147762200 Weak transcription Fetal Intestine Small intestine
47 chr5:147758800-147761200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr5:147758800-147763000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr5:147759400-147761800 Enhancers Fetal Heart heart
50 chr5:147759400-147762800 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015