Variant report

Variant	rs73290537
Chromosome Location	chr8:102932961-102932962
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11986985	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11997933	0.86[EUR][1000 genomes]
rs16868433	0.83[EUR][1000 genomes]
rs16868457	0.83[EUR][1000 genomes]
rs56731949	1.00[EUR][1000 genomes]
rs58133251	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58912743	1.00[EUR][1000 genomes]
rs59182464	1.00[ASN][1000 genomes]
rs60240355	1.00[EUR][1000 genomes]
rs60942694	1.00[EUR][1000 genomes]
rs61308131	0.83[EUR][1000 genomes]
rs6985642	0.82[AFR][1000 genomes]
rs6998151	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6998300	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73277021	0.83[EUR][1000 genomes]
rs73280889	0.83[EUR][1000 genomes]
rs73280895	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73696511	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73696568	0.82[AFR][1000 genomes]
rs73696582	1.00[EUR][1000 genomes]
rs73696583	1.00[EUR][1000 genomes]
rs73696584	1.00[EUR][1000 genomes]
rs7814586	0.80[AFR][1000 genomes]
rs7839949	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018653	chr8:102818271-103009082	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv539700	chr8:102818271-103009082	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102915200-102938800	Weak transcription	Aorta	Aorta
2	chr8:102916200-102942600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr8:102920600-102956600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr8:102921200-102938200	Weak transcription	Ovary	ovary
5	chr8:102925000-102936600	Weak transcription	Fetal Heart	heart
6	chr8:102932400-102938200	Weak transcription	Lung	lung

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links