Variant report

Variant	rs73302885
Chromosome Location	chr8:105803140-105803141
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:105802167..105803888-chr8:105805525..105808346,2	K562	blood:
2	chr8:105802462..105804177-chr8:105823337..105826088,2	MCF-7	breast:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12548401	1.00[AMR][1000 genomes]
rs1996780	1.00[AMR][1000 genomes]
rs56981817	1.00[AMR][1000 genomes]
rs57778138	1.00[AMR][1000 genomes]
rs61265653	1.00[AMR][1000 genomes]
rs61661712	1.00[AMR][1000 genomes]
rs73297183	1.00[AMR][1000 genomes]
rs73297190	1.00[AMR][1000 genomes]
rs73299109	1.00[AMR][1000 genomes]
rs73299155	1.00[AMR][1000 genomes]
rs73299164	1.00[AMR][1000 genomes]
rs73299178	1.00[AMR][1000 genomes]
rs73299182	1.00[AMR][1000 genomes]
rs73299184	1.00[AMR][1000 genomes]
rs73299194	1.00[AMR][1000 genomes]
rs73299196	1.00[AMR][1000 genomes]
rs73301121	1.00[AMR][1000 genomes]
rs73301131	1.00[AMR][1000 genomes]
rs73301181	1.00[AMR][1000 genomes]
rs73301197	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016087	chr8:105228670-105934368	Weak transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
2	nsv1026754	chr8:105382508-106030916	Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
3	nsv539709	chr8:105382508-106030916	Enhancers Weak transcription Genic enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
4	nsv1032476	chr8:105609904-106030916	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	nsv539710	chr8:105609904-106030916	Enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
6	nsv465754	chr8:105764528-105878832	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	n/a
7	nsv611836	chr8:105764528-105878832	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:105801600-105803400	Weak transcription	Liver	Liver
2	chr8:105801600-105805400	Weak transcription	K562	blood

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