Variant report

Variant	rs73313956
Chromosome Location	chr12:33592590-33592591
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ZNF263	chr12:33591326-33592829	HEK293-T-REx	kidney:	n/a	chr12:33592503-33592524
2	POLR2A	chr12:33591747-33592995	H1-neurons	neurons:	n/a	n/a
3	MAX	chr12:33591697-33593128	MCF-7	breast:	n/a	chr12:33592813-33592823
4	E2F6	chr12:33592449-33593052	K562	blood:	n/a	chr12:33592531-33592542 chr12:33592698-33592710
5	GTF2F1	chr12:33592486-33592896	H1-hESC	embryonic stem cell:	n/a	n/a
6	POLR2A	chr12:33591890-33592796	H1-hESC	embryonic stem cell:	n/a	n/a
7	POLR2A	chr12:33591817-33592928	H1-hESC	embryonic stem cell:	n/a	n/a
8	JUND	chr12:33592510-33592733	H1-hESC	embryonic stem cell:	n/a	n/a
9	MAX	chr12:33591049-33592970	H1-hESC	embryonic stem cell:	n/a	chr12:33592813-33592823
10	HEY1	chr12:33592217-33592755	K562	blood:	n/a	n/a
11	PML	chr12:33592479-33592931	MCF-7	breast:	n/a	n/a
12	HCFC1	chr12:33592306-33592771	K562	blood:	n/a	n/a
13	BHLHE40	chr12:33592354-33592978	K562	blood:	n/a	n/a
14	POLR2A	chr12:33592436-33592879	K562	blood:	n/a	n/a
15	MAX	chr12:33591731-33593058	H1-hESC	embryonic stem cell:	n/a	chr12:33592813-33592823
16	HDAC2	chr12:33591777-33593077	MCF-7	breast:	n/a	chr12:33592478-33592492
17	YY1	chr12:33592453-33592902	K562	blood:	n/a	chr12:33592673-33592684 chr12:33592669-33592683 chr12:33592628-33592639
18	RAD21	chr12:33592315-33593136	H1-hESC	embryonic stem cell:	n/a	chr12:33592669-33592683
19	RCOR1	chr12:33591532-33593036	K562	blood:	n/a	n/a
20	CHD2	chr12:33591907-33592990	H1-hESC	embryonic stem cell:	n/a	chr12:33592659-33592669 chr12:33592765-33592775
21	POLR2A	chr12:33591866-33592993	K562	blood:	n/a	n/a
22	TAF1	chr12:33592557-33592844	H1-hESC	embryonic stem cell:	n/a	n/a
23	MAX	chr12:33592503-33593041	K562	blood:	n/a	chr12:33592813-33592823
24	POLR2A	chr12:33591860-33593022	K562	blood:	n/a	n/a
25	UBTF	chr12:33591935-33593146	K562	blood:	n/a	n/a
26	MAX	chr12:33592481-33592988	K562	blood:	n/a	chr12:33592813-33592823
27	TBP	chr12:33590582-33593043	K562	blood:	n/a	n/a
28	TAF1	chr12:33592432-33592956	K562	blood:	n/a	n/a
29	YY1	chr12:33592217-33592901	H1-hESC	embryonic stem cell:	n/a	chr12:33592673-33592684 chr12:33592669-33592683 chr12:33592628-33592639
30	MYC	chr12:33591839-33592970	K562	blood:	n/a	chr12:33592813-33592823
31	POLR2A	chr12:33592575-33592876	H1-hESC	embryonic stem cell:	n/a	n/a
32	TAF1	chr12:33591831-33592917	H1-hESC	embryonic stem cell:	n/a	n/a
33	SIN3AK20	chr12:33592235-33592970	MCF-7	breast:	n/a	n/a
34	JUND	chr12:33592564-33592792	H1-hESC	embryonic stem cell:	n/a	n/a
35	MAX	chr12:33591651-33593122	H1-hESC	embryonic stem cell:	n/a	chr12:33592813-33592823
36	ZNF143	chr12:33592222-33592932	H1-hESC	embryonic stem cell:	n/a	chr12:33592880-33592890
37	TCF12	chr12:33592575-33592784	H1-hESC	embryonic stem cell:	n/a	n/a
38	EP300	chr12:33592575-33592607	K562	blood:	n/a	n/a
39	BACH1	chr12:33592008-33593130	H1-hESC	embryonic stem cell:	n/a	n/a
40	TAF1	chr12:33592432-33592934	MCF-7	breast:	n/a	n/a
41	TEAD4	chr12:33592533-33592884	H1-hESC	embryonic stem cell:	n/a	n/a
42	E2F6	chr12:33591601-33593148	H1-hESC	embryonic stem cell:	n/a	chr12:33592531-33592542 chr12:33592698-33592710 chr12:33593087-33593096
43	YY1	chr12:33592475-33592857	K562	blood:	n/a	chr12:33592673-33592684 chr12:33592669-33592683 chr12:33592628-33592639
44	SIN3AK20	chr12:33591550-33593253	MCF-7	breast:	n/a	n/a
45	ZBTB7A	chr12:33592541-33592920	K562	blood:	n/a	n/a
46	E2F6	chr12:33591043-33593180	H1-hESC	embryonic stem cell:	n/a	chr12:33592531-33592542 chr12:33592698-33592710 chr12:33593087-33593096
47	ZMIZ1	chr12:33592473-33593009	K562	blood:	n/a	n/a
48	MXI1	chr12:33592505-33592883	H1-hESC	embryonic stem cell:	n/a	n/a
49	POLR2A	chr12:33590894-33593146	MCF-7	breast:	n/a	n/a
50	MYC	chr12:33590575-33592903	K562	blood:	n/a	chr12:33592813-33592823

Variant related genes	Relation type
SYT10	TF binding region

Extended variants
information (count: 115 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:84)

rs_ID	r²[population]
rs10437796	0.84[EUR][1000 genomes]
rs10466764	0.90[ASN][1000 genomes]
rs10772078	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10772080	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10772081	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10772082	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10772084	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844558	0.83[ASN][1000 genomes]
rs10844566	0.92[ASN][1000 genomes]
rs10844567	0.92[ASN][1000 genomes]
rs10844568	0.92[ASN][1000 genomes]
rs10844570	0.92[ASN][1000 genomes]
rs10844571	0.92[ASN][1000 genomes]
rs10844572	0.92[ASN][1000 genomes]
rs10844591	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10844592	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844593	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844594	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844595	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844596	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844598	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844599	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844600	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10844601	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844602	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844603	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844604	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844605	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844606	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10844608	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11052630	0.81[ASN][1000 genomes]
rs11052637	0.83[ASN][1000 genomes]
rs11052649	0.87[ASN][1000 genomes]
rs11052657	0.92[ASN][1000 genomes]
rs11052659	0.92[ASN][1000 genomes]
rs11052663	0.92[ASN][1000 genomes]
rs11052669	0.92[ASN][1000 genomes]
rs11052690	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11052694	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11052695	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11052696	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11052697	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11052698	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11052703	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12227590	0.88[ASN][1000 genomes]
rs12302300	0.83[ASN][1000 genomes]
rs12318039	0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12322653	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1482990	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16916410	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16921002	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16921021	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1905426	0.92[ASN][1000 genomes]
rs1947969	0.92[ASN][1000 genomes]
rs1994166	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1994167	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2389198	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35020525	0.92[ASN][1000 genomes]
rs4931716	0.83[ASN][1000 genomes]
rs56161708	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59499949	0.92[ASN][1000 genomes]
rs60021869	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60061814	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60231799	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61041826	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6488154	0.83[ASN][1000 genomes]
rs6488155	0.83[ASN][1000 genomes]
rs6488156	0.87[ASN][1000 genomes]
rs66760012	0.82[EUR][1000 genomes]
rs7134644	0.87[ASN][1000 genomes]
rs7134904	0.87[ASN][1000 genomes]
rs7298158	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7298385	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7298455	0.83[ASN][1000 genomes]
rs7301783	0.80[EUR][1000 genomes]
rs7302123	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7309592	0.92[ASN][1000 genomes]
rs7965935	0.81[EUR][1000 genomes]
rs7970433	0.83[ASN][1000 genomes]
rs7973722	0.92[ASN][1000 genomes]
rs7973728	0.92[ASN][1000 genomes]
rs9888364	0.92[ASN][1000 genomes]
rs9888374	0.92[ASN][1000 genomes]
rs9888427	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:31 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1037459	chr12:33310703-33905662	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	nsv541459	chr12:33310703-33905662	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
3	nsv1035988	chr12:33399053-33699363	Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
4	nsv558247	chr12:33481504-34245756	Weak transcription Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
5	nsv1037735	chr12:33510115-34457196	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
6	nsv558248	chr12:33524082-33714866	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
7	nsv469348	chr12:33524082-34245756	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
8	nsv558249	chr12:33524082-34245756	Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
9	nsv1047430	chr12:33526355-34435009	Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
10	nsv1040037	chr12:33526355-34457196	Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
11	nsv1055087	chr12:33527371-34078208	Enhancers Bivalent/Poised TSS Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
12	nsv541461	chr12:33527371-34078208	Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
13	nsv1049273	chr12:33528203-34491300	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription Enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
14	nsv541462	chr12:33528203-34491300	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
15	nsv1042712	chr12:33528204-34427733	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
16	nsv541463	chr12:33528204-34427733	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
17	nsv1047392	chr12:33528403-34427593	Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
18	nsv541464	chr12:33528403-34427593	Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
19	nsv1051183	chr12:33528403-34491152	Active TSS Bivalent/Poised TSS ZNF genes & repeats Enhancers Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
20	nsv541465	chr12:33528403-34491152	Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
21	nsv1036239	chr12:33528828-34008814	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
22	nsv1037202	chr12:33538510-34064222	Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
23	nsv541466	chr12:33538510-34064222	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
24	nsv1035385	chr12:33538510-34078208	Bivalent/Poised TSS Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
25	nsv541467	chr12:33538510-34078208	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
26	nsv1052700	chr12:33542309-34078208	Enhancers Bivalent/Poised TSS ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
27	nsv541468	chr12:33542309-34078208	Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
28	nsv558255	chr12:33543220-34000986	Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
29	nsv1051117	chr12:33545148-34079849	Bivalent/Poised TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
30	nsv541469	chr12:33545148-34079849	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
31	nsv932193	chr12:33545149-34096639	Bivalent/Poised TSS Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:33589800-33595600	Active TSS	K562	blood
2	chr12:33590600-33593200	Active TSS	Brain Anterior Caudate	brain
3	chr12:33590600-33593400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
4	chr12:33591000-33592600	Bivalent/Poised TSS	Brain Inferior Temporal Lobe	brain
5	chr12:33591000-33592800	Bivalent/Poised TSS	Brain Cingulate Gyrus	brain
6	chr12:33591000-33592800	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum
7	chr12:33591000-33593000	Bivalent/Poised TSS	Fetal Intestine Small	intestine
8	chr12:33591000-33593000	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
9	chr12:33591000-33593200	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
10	chr12:33591000-33593200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
11	chr12:33591000-33593200	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum
12	chr12:33591000-33593200	Bivalent/Poised TSS	Fetal Kidney	kidney
13	chr12:33591000-33593400	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
14	chr12:33591000-33593400	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
15	chr12:33591200-33592800	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
16	chr12:33591200-33593000	Active TSS	Pancreatic Islets	Pancreatic Islet
17	chr12:33591200-33593200	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
18	chr12:33591400-33593000	Bivalent/Poised TSS	Ovary	ovary
19	chr12:33591400-33593200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr12:33591400-33593200	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr12:33591400-33593400	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
22	chr12:33591400-33593400	Bivalent/Poised TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr12:33591400-33593400	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
24	chr12:33591600-33592600	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
25	chr12:33591600-33592800	Flanking Bivalent TSS/Enh	Ganglion Eminence derived primary cultured neurospheres	brain
26	chr12:33591600-33593000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr12:33591600-33593000	Bivalent/Poised TSS	Duodenum Mucosa	Duodenum
28	chr12:33591600-33593000	Bivalent/Poised TSS	Rectal Mucosa Donor 31	rectum
29	chr12:33591600-33593400	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
30	chr12:33591600-33593400	Bivalent/Poised TSS	Brain Germinal Matrix	brain
31	chr12:33591800-33592600	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr12:33591800-33592600	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr12:33591800-33592600	Bivalent/Poised TSS	Colon Smooth Muscle	Colon
34	chr12:33591800-33592600	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
35	chr12:33591800-33592600	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
36	chr12:33591800-33592600	Flanking Bivalent TSS/Enh	HMEC	breast
37	chr12:33591800-33592600	Bivalent/Poised TSS	NHEK	skin
38	chr12:33591800-33592800	Bivalent/Poised TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr12:33591800-33592800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells	blood
40	chr12:33591800-33592800	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
41	chr12:33591800-33592800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr12:33591800-33592800	Bivalent/Poised TSS	HUVEC	blood vessel
43	chr12:33591800-33593000	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr12:33591800-33593000	Flanking Bivalent TSS/Enh	Cortex derived primary cultured neurospheres	brain
45	chr12:33591800-33593000	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin01	Skin
46	chr12:33591800-33593000	Bivalent/Poised TSS	Colonic Mucosa	Colon
47	chr12:33591800-33593000	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
48	chr12:33591800-33593000	Active TSS	Gastric	stomach
49	chr12:33591800-33593000	Bivalent/Poised TSS	Thymus	Thymus
50	chr12:33591800-33593200	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin03	Skin

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