Variant report
| Variant | rs73320490 |
|---|---|
| Chromosome Location | chr14:78964184-78964185 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:27)
| rs_ID | r2[population] |
|---|---|
| rs17107516 | 1.00[AMR][1000 genomes] |
| rs17107519 | 1.00[AMR][1000 genomes] |
| rs17107523 | 1.00[AMR][1000 genomes] |
| rs17107530 | 1.00[AMR][1000 genomes] |
| rs17107594 | 1.00[AMR][1000 genomes] |
| rs17107611 | 1.00[AMR][1000 genomes] |
| rs56923572 | 1.00[AMR][1000 genomes] |
| rs58330928 | 1.00[AMR][1000 genomes] |
| rs59762056 | 1.00[AMR][1000 genomes] |
| rs59819728 | 1.00[AMR][1000 genomes] |
| rs61052532 | 1.00[AMR][1000 genomes] |
| rs73316040 | 1.00[AMR][1000 genomes] |
| rs73316042 | 1.00[AMR][1000 genomes] |
| rs73316045 | 1.00[AMR][1000 genomes] |
| rs73316421 | 1.00[AMR][1000 genomes] |
| rs73316436 | 1.00[AMR][1000 genomes] |
| rs73316456 | 1.00[AMR][1000 genomes] |
| rs73316459 | 1.00[AMR][1000 genomes] |
| rs73316471 | 1.00[AMR][1000 genomes] |
| rs73316478 | 1.00[AMR][1000 genomes] |
| rs73320491 | 1.00[AMR][1000 genomes] |
| rs73324490 | 1.00[AMR][1000 genomes] |
| rs73327195 | 1.00[AMR][1000 genomes] |
| rs73327200 | 1.00[AMR][1000 genomes] |
| rs73329110 | 1.00[AMR][1000 genomes] |
| rs73329120 | 1.00[AMR][1000 genomes] |
| rs73329172 | 1.00[AMR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv2760000 | chr14:78875607-79173528 | Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
| 2 | esv2758363 | chr14:78903610-79173528 | Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr14:78964000-78964800 | Enhancers | Brain Angular Gyrus | brain |
| 2 | chr14:78964000-78965200 | Enhancers | Brain Hippocampus Middle | brain |
