Variant report

Variant	rs73322009
Chromosome Location	chr10:93384786-93384787
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:93368025..93369544-chr10:93384747..93386329,2	K562	blood:
2	chr10:93381705..93385054-chr10:93391118..93393764,3	MCF-7	breast:
3	chr10:93383075..93384878-chr10:93391470..93393410,2	MCF-7	breast:
4	chr10:93384412..93386495-chr10:93387142..93388723,2	K562	blood:
5	chr10:93383247..93385576-chr10:93389131..93391344,3	MCF-7	breast:
6	chr10:93379993..93381924-chr10:93383297..93385615,2	K562	blood:

Variant related genes	Relation type
ENSG00000119938	Chromatin interaction

rs_ID	r²[population]
rs2421619	0.88[AFR][1000 genomes]
rs4607983	0.92[AFR][1000 genomes]
rs57609269	0.92[AFR][1000 genomes]
rs58049168	0.92[AFR][1000 genomes]
rs58579342	0.92[AFR][1000 genomes]
rs60400838	0.92[AFR][1000 genomes]
rs7071663	0.88[AFR][1000 genomes]
rs7087444	1.00[AFR][1000 genomes]
rs7088018	1.00[AFR][1000 genomes]
rs73320159	0.88[AFR][1000 genomes]
rs73320161	0.92[AFR][1000 genomes]
rs73320165	0.92[AFR][1000 genomes]
rs73320170	0.92[AFR][1000 genomes]
rs73320175	0.92[AFR][1000 genomes]
rs73320176	0.80[AFR][1000 genomes]
rs73320178	0.92[AFR][1000 genomes]
rs73320183	0.92[AFR][1000 genomes]
rs73320188	0.92[AFR][1000 genomes]
rs73320195	0.92[AFR][1000 genomes]
rs73320196	0.92[AFR][1000 genomes]
rs73320202	1.00[AFR][1000 genomes]
rs73322006	1.00[AFR][1000 genomes]
rs73322014	1.00[AFR][1000 genomes]
rs73322017	1.00[AFR][1000 genomes]
rs73322019	0.88[AFR][1000 genomes]
rs73322022	0.88[AFR][1000 genomes]
rs73322023	1.00[AFR][1000 genomes]
rs73322027	0.88[AFR][1000 genomes]
rs73322031	1.00[AFR][1000 genomes]

Chromatin state (count:50 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93368000-93388600	Weak transcription	Brain Angular Gyrus	brain
2	chr10:93369000-93387600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr10:93369600-93387800	Weak transcription	Fetal Brain Male	brain
4	chr10:93371400-93386800	Weak transcription	Pancreas	Pancrea
5	chr10:93374000-93384800	Weak transcription	Duodenum Smooth Muscle	Duodenum
6	chr10:93374000-93386200	Weak transcription	Left Ventricle	heart
7	chr10:93374000-93387000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr10:93377400-93386200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr10:93377400-93386800	Weak transcription	Stomach Mucosa	stomach
10	chr10:93377400-93387600	Weak transcription	Esophagus	oesophagus
11	chr10:93377400-93387600	Weak transcription	HSMM	muscle
12	chr10:93377400-93387800	Weak transcription	Psoas Muscle	Psoas
13	chr10:93377400-93389600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr10:93377600-93387600	Weak transcription	NHEK	skin
15	chr10:93377600-93387800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr10:93377600-93388000	Weak transcription	HSMMtube	muscle
17	chr10:93377800-93387600	Weak transcription	Muscle Satellite Cultured Cells	--
18	chr10:93378600-93389000	Weak transcription	Hela-S3	cervix
19	chr10:93380000-93385200	Weak transcription	Fetal Intestine Small	intestine
20	chr10:93382000-93387600	Weak transcription	HepG2	liver
21	chr10:93382200-93384800	Weak transcription	Fetal Stomach	stomach
22	chr10:93382200-93387800	Weak transcription	Lung	lung
23	chr10:93382600-93387600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
24	chr10:93382800-93386400	Weak transcription	Liver	Liver
25	chr10:93382800-93387600	Weak transcription	Brain Anterior Caudate	brain
26	chr10:93382800-93387600	Weak transcription	Colon Smooth Muscle	Colon
27	chr10:93382800-93388200	Weak transcription	Brain Inferior Temporal Lobe	brain
28	chr10:93383000-93385600	Strong transcription	Fetal Lung	lung
29	chr10:93383000-93388200	Weak transcription	Pancreatic Islets	Pancreatic Islet
30	chr10:93383000-93388600	Weak transcription	Brain Hippocampus Middle	brain
31	chr10:93383400-93385400	Strong transcription	Aorta	Aorta
32	chr10:93383400-93385400	Strong transcription	Fetal Muscle Leg	muscle
33	chr10:93383600-93385200	Strong transcription	Fetal Intestine Large	intestine
34	chr10:93383600-93385200	Strong transcription	Right Ventricle	heart
35	chr10:93383600-93385400	Strong transcription	Ovary	ovary
36	chr10:93383600-93385400	Strong transcription	Skeletal Muscle Male	skeletal muscle
37	chr10:93383600-93385600	Weak transcription	NHDF-Ad	bronchial
38	chr10:93383800-93385200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr10:93383800-93385400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
40	chr10:93383800-93387600	Weak transcription	Fetal Muscle Trunk	muscle
41	chr10:93383800-93387600	Weak transcription	Osteobl	bone
42	chr10:93383800-93388200	Strong transcription	Cortex derived primary cultured neurospheres	brain
43	chr10:93384000-93385000	Strong transcription	NHLF	lung
44	chr10:93384000-93386400	Strong transcription	Stomach Smooth Muscle	stomach
45	chr10:93384000-93388600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr10:93384200-93385600	Strong transcription	Skeletal Muscle Female	skeletal muscle
47	chr10:93384200-93386400	Weak transcription	Fetal Heart	heart
48	chr10:93384200-93386800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
49	chr10:93384200-93387600	Weak transcription	Rectal Smooth Muscle	rectum
50	chr10:93384600-93385400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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