Variant report

rSNPs within LD-proxies of this variant (count:37)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1067334	chr17:66695039-67221585	Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	16 gene(s)	inside rSNPs	diseases
2	nsv543411	chr17:66695039-67221585	Flanking Active TSS Strong transcription Enhancers Weak transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	16 gene(s)	inside rSNPs	diseases
3	nsv523831	chr17:66733138-66738905	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:66729000-66734600	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr17:66731000-66736800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr17:66733400-66734600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr17:66733400-66734600	Enhancers	Pancreatic Islets	Pancreatic Islet
5	chr17:66733400-66734600	Enhancers	Ovary	ovary
6	chr17:66733600-66734600	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr17:66733600-66734600	Enhancers	Fetal Heart	heart
8	chr17:66733600-66734800	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr17:66733800-66734600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr17:66733800-66734600	Enhancers	iPS-20b Cell Line	embryonic stem cell
11	chr17:66734000-66734600	Enhancers	H9 Cell Line	embryonic stem cell
12	chr17:66734000-66734600	Enhancers	HUES6 Cell Line	embryonic stem cell
13	chr17:66734000-66734600	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr17:66734000-66734600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
15	chr17:66734000-66734600	Enhancers	Left Ventricle	heart
16	chr17:66734000-66734800	Enhancers	H1 Cell Line	embryonic stem cell
17	chr17:66734000-66734800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr17:66734000-66735200	Enhancers	Fetal Brain Male	brain
19	chr17:66734200-66734600	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr17:66734200-66736800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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