Variant report

Variant	rs73370398
Chromosome Location	chr6:15926975-15926976
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs12332932	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16877335	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16877356	0.95[ASN][1000 genomes]
rs28374372	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28439195	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28675672	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34348178	0.93[ASN][1000 genomes]
rs6931813	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6932716	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72825643	0.80[ASN][1000 genomes]
rs72825644	0.80[ASN][1000 genomes]
rs73370392	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73372206	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7739957	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7754622	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9476982	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9476983	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9476984	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9476987	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15921600-15927600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr6:15921600-15929400	Weak transcription	Adipose Nuclei	Adipose
3	chr6:15926000-15931000	Weak transcription	Aorta	Aorta
4	chr6:15926400-15927000	Enhancers	Right Atrium	heart
5	chr6:15926400-15927200	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr6:15926400-15927200	Enhancers	Skeletal Muscle Female	skeletal muscle
7	chr6:15926400-15928000	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr6:15926600-15927000	Enhancers	K562	blood
9	chr6:15926600-15927200	Enhancers	Primary hematopoietic stem cells short term culture	blood
10	chr6:15926600-15927400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr6:15926600-15927800	Enhancers	Psoas Muscle	Psoas
12	chr6:15926600-15928200	Enhancers	Primary monocytes fromperipheralblood	blood
13	chr6:15926600-15929400	Enhancers	Monocytes-CD14+_RO01746	blood
14	chr6:15926600-15930000	Enhancers	Placenta	Placenta
15	chr6:15926800-15927000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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