The 2.0 version of rSNPBase

Variant report

Variant rs73406036
Chromosome Location chr15:49914940-49914941
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49911400-49916000 Active TSS Stomach Smooth Muscle stomach
2 chr15:49911600-49916600 Active TSS GM12878-XiMat blood
3 chr15:49911800-49915200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr15:49912000-49915000 Active TSS Skeletal Muscle Female skeletal muscle
5 chr15:49912400-49915200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr15:49912600-49915800 Active TSS Primary hematopoietic stem cells short term culture blood
7 chr15:49912800-49915000 Active TSS Pancreas Pancrea
8 chr15:49913600-49915000 Flanking Active TSS Adipose Nuclei Adipose
9 chr15:49913600-49916600 Flanking Active TSS Osteobl bone
10 chr15:49913600-49937400 Weak transcription Spleen Spleen
11 chr15:49913800-49916200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr15:49913800-49916600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr15:49914000-49915000 Enhancers Primary B cells from peripheral blood blood
14 chr15:49914000-49915600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr15:49914000-49915600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr15:49914000-49915600 Enhancers Primary T helper cells fromperipheralblood blood
17 chr15:49914000-49917000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr15:49914000-49917800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr15:49914000-49917800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr15:49914000-49917800 Weak transcription Esophagus oesophagus
21 chr15:49914000-49917800 Weak transcription Left Ventricle heart
22 chr15:49914000-49917800 Weak transcription Lung lung
23 chr15:49914000-49930000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr15:49914200-49915000 Enhancers Primary monocytes fromperipheralblood blood
25 chr15:49914200-49915000 Enhancers Primary T cells fromperipheralblood blood
26 chr15:49914200-49915000 Enhancers Fetal Thymus thymus
27 chr15:49914200-49915400 Enhancers Skeletal Muscle Male skeletal muscle
28 chr15:49914200-49916200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr15:49914200-49916200 Flanking Active TSS NHDF-Ad bronchial
30 chr15:49914200-49916600 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr15:49914400-49915000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr15:49914400-49915000 Enhancers Cortex derived primary cultured neurospheres brain
33 chr15:49914400-49915200 Enhancers Brain Angular Gyrus brain
34 chr15:49914400-49915800 Enhancers Primary hematopoietic stem cells blood
35 chr15:49914400-49915800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr15:49914400-49916000 Enhancers Brain Cingulate Gyrus brain
37 chr15:49914400-49916000 Enhancers Brain Inferior Temporal Lobe brain
38 chr15:49914400-49916000 Enhancers Fetal Muscle Leg muscle
39 chr15:49914400-49916000 Enhancers Psoas Muscle Psoas
40 chr15:49914400-49916200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr15:49914400-49916200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
42 chr15:49914400-49916600 Enhancers Primary T cells from cord blood blood
43 chr15:49914400-49917400 Weak transcription Fetal Muscle Trunk muscle
44 chr15:49914400-49917400 Weak transcription Placenta Placenta
45 chr15:49914400-49917600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr15:49914400-49917800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr15:49914400-49917800 Weak transcription H9 Cell Line embryonic stem cell
48 chr15:49914400-49917800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr15:49914400-49917800 Weak transcription Aorta Aorta
50 chr15:49914400-49917800 Weak transcription Colonic Mucosa Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015