Variant report

Variant	rs73422913
Chromosome Location	chr9:18119610-18119611
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs2265962	1.00[AMR][1000 genomes]
rs2493745	1.00[AMR][1000 genomes]
rs2809855	1.00[AMR][1000 genomes]
rs2819202	1.00[AMR][1000 genomes]
rs56137310	1.00[AMR][1000 genomes]
rs57035045	1.00[AMR][1000 genomes]
rs58927234	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59895508	1.00[AMR][1000 genomes]
rs61086890	1.00[AMR][1000 genomes]
rs73420847	1.00[AMR][1000 genomes]
rs73420850	1.00[AMR][1000 genomes]
rs73420855	1.00[AMR][1000 genomes]
rs73420856	1.00[AMR][1000 genomes]
rs73420860	1.00[AMR][1000 genomes]
rs73420864	1.00[AMR][1000 genomes]
rs73420866	1.00[AMR][1000 genomes]
rs73420869	1.00[AMR][1000 genomes]
rs73420873	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73424909	1.00[AMR][1000 genomes]
rs73424911	1.00[AMR][1000 genomes]
rs73426941	1.00[AMR][1000 genomes]
rs73426948	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021605	chr9:18002205-18271109	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv466280	chr9:18033944-18166112	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv471288	chr9:18033944-18166112	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv613723	chr9:18033944-18166112	Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv892679	chr9:18044802-18226609	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv892680	chr9:18089614-18267185	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:18116000-18127600	Weak transcription	Aorta	Aorta

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links