Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	11:64233404-64254719..11:64489786-64499245	Hela-S3	cervix:
2	11:64233404-64254719..11:64626490-64631647	Hela-S3	cervix:
3	11:64233404-64254719..11:64544826-64559210	Hela-S3	cervix:
4	11:64233404-64254719..11:64415880-64426617	H1-hESC	embryonic stem cell:	embryo

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1207462	1.00[EUR][1000 genomes]
rs12575515	1.00[EUR][1000 genomes]
rs17159251	1.00[EUR][1000 genomes]
rs34318219	1.00[EUR][1000 genomes]
rs490720	1.00[EUR][1000 genomes]
rs539008	1.00[EUR][1000 genomes]
rs554812	1.00[EUR][1000 genomes]
rs569741	1.00[EUR][1000 genomes]
rs575081	1.00[EUR][1000 genomes]
rs58010797	1.00[EUR][1000 genomes]
rs58488481	1.00[EUR][1000 genomes]
rs6591855	1.00[EUR][1000 genomes]
rs7115265	1.00[EUR][1000 genomes]
rs7124976	1.00[EUR][1000 genomes]
rs71579879	1.00[EUR][1000 genomes]
rs72559736	1.00[EUR][1000 genomes]
rs73488285	1.00[EUR][1000 genomes]
rs73488288	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73488293	1.00[EUR][1000 genomes]
rs73488302	0.90[AFR][1000 genomes]
rs73490204	0.81[AFR][1000 genomes]
rs73490206	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73490209	0.81[AFR][1000 genomes]
rs73490261	1.00[EUR][1000 genomes]
rs7947416	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832187	chr11:64121969-64312300	Genic enhancers Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv1035485	chr11:64228847-64354869	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:64245400-64251800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr11:64249600-64249800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr11:64249600-64252400	Enhancers	Fetal Muscle Leg	muscle

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