Variant report

Variant rs73489242
Chromosome Location chr13:48532284-48532285
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48507200-48548800 Weak transcription Stomach Mucosa stomach
2 chr13:48511000-48536600 Weak transcription Esophagus oesophagus
3 chr13:48512600-48537600 Weak transcription Hela-S3 cervix
4 chr13:48512800-48533800 Weak transcription NHLF lung
5 chr13:48514400-48574000 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr13:48519600-48533800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr13:48523000-48541600 Weak transcription Psoas Muscle Psoas
8 chr13:48523000-48542600 Weak transcription K562 blood
9 chr13:48523200-48534000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr13:48523200-48536600 Weak transcription Placenta Amnion Placenta Amnion
11 chr13:48525800-48532400 Strong transcription Duodenum Smooth Muscle Duodenum
12 chr13:48526400-48532600 Strong transcription Primary T helper cells PMA-I stimulated --
13 chr13:48526400-48533600 Weak transcription Right Ventricle heart
14 chr13:48528000-48545800 Weak transcription Colon Smooth Muscle Colon
15 chr13:48528600-48541000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr13:48529200-48537200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr13:48529400-48532600 Strong transcription Ovary ovary
18 chr13:48529400-48537000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr13:48529400-48540200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
20 chr13:48529600-48532400 ZNF genes & repeats Primary B cells from cord blood blood
21 chr13:48529600-48532600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr13:48529600-48535800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
23 chr13:48529800-48532400 ZNF genes & repeats Primary hematopoietic stem cells blood
24 chr13:48529800-48532400 ZNF genes & repeats Brain Germinal Matrix brain
25 chr13:48529800-48532400 ZNF genes & repeats Fetal Brain Female brain
26 chr13:48529800-48532600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr13:48529800-48532600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
28 chr13:48529800-48532800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
29 chr13:48529800-48532800 ZNF genes & repeats GM12878-XiMat blood
30 chr13:48529800-48533400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr13:48530000-48532400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr13:48530000-48532600 ZNF genes & repeats Fetal Lung lung
33 chr13:48530000-48532600 ZNF genes & repeats A549 lung
34 chr13:48530000-48532800 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
35 chr13:48530000-48535200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
36 chr13:48530000-48537200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
37 chr13:48530000-48538400 ZNF genes & repeats Dnd41 blood
38 chr13:48530000-48541000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr13:48530000-48541200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
40 chr13:48530200-48533000 ZNF genes & repeats Primary T cells from cord blood blood
41 chr13:48530400-48532600 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
42 chr13:48530400-48532600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
43 chr13:48530400-48532600 ZNF genes & repeats Fetal Muscle Trunk muscle
44 chr13:48530400-48534200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
45 chr13:48530600-48532400 ZNF genes & repeats H9 Cell Line embryonic stem cell
46 chr13:48530600-48532600 Strong transcription Stomach Smooth Muscle stomach
47 chr13:48530600-48532600 ZNF genes & repeats HepG2 liver
48 chr13:48530600-48532800 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
49 chr13:48530600-48534000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr13:48530600-48534200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin

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