Variant report

Variant rs7338125
Chromosome Location chr13:48540943-48540944
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48507200-48548800 Weak transcription Stomach Mucosa stomach
2 chr13:48514400-48574000 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr13:48523000-48541600 Weak transcription Psoas Muscle Psoas
4 chr13:48523000-48542600 Weak transcription K562 blood
5 chr13:48528000-48545800 Weak transcription Colon Smooth Muscle Colon
6 chr13:48528600-48541000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr13:48530000-48541000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr13:48530000-48541200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
9 chr13:48532000-48551400 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr13:48532200-48565200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr13:48532400-48546000 Weak transcription Aorta Aorta
12 chr13:48532400-48559400 Weak transcription Gastric stomach
13 chr13:48532400-48565200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr13:48532600-48545800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr13:48532800-48545800 Weak transcription Brain Substantia Nigra brain
16 chr13:48533800-48548000 Strong transcription Primary monocytes fromperipheralblood blood
17 chr13:48534000-48541200 Strong transcription Fetal Thymus thymus
18 chr13:48534000-48543000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr13:48534000-48560800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr13:48534200-48541400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr13:48534200-48541600 Weak transcription Rectal Smooth Muscle rectum
22 chr13:48534200-48542800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr13:48534200-48542800 Strong transcription Adipose Nuclei Adipose
24 chr13:48534200-48543000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr13:48534200-48545200 Weak transcription Spleen Spleen
26 chr13:48534200-48545800 Weak transcription Brain Cingulate Gyrus brain
27 chr13:48534200-48573200 Weak transcription Brain Angular Gyrus brain
28 chr13:48534400-48541000 Strong transcription Primary T helper cells fromperipheralblood blood
29 chr13:48534400-48541400 Strong transcription Fetal Muscle Leg muscle
30 chr13:48534400-48543200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr13:48534400-48544400 Strong transcription Primary T regulatory cells fromperipheralblood blood
32 chr13:48534400-48574400 Weak transcription Small Intestine intestine
33 chr13:48534600-48546000 Weak transcription Brain Inferior Temporal Lobe brain
34 chr13:48534600-48550400 Weak transcription Right Ventricle heart
35 chr13:48535000-48564800 Weak transcription NHLF lung
36 chr13:48535200-48545000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr13:48535200-48552000 Strong transcription Monocytes-CD14+_RO01746 blood
38 chr13:48536000-48550400 Weak transcription Fetal Heart heart
39 chr13:48536200-48541200 Strong transcription Fetal Intestine Large intestine
40 chr13:48536200-48542800 Strong transcription Primary B cells from peripheral blood blood
41 chr13:48536200-48550000 Weak transcription NHEK skin
42 chr13:48536400-48543000 Strong transcription Breast Myoepithelial Primary Cells Breast
43 chr13:48536600-48542800 Strong transcription HSMM muscle
44 chr13:48536800-48547800 Strong transcription Liver Liver
45 chr13:48537000-48542800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr13:48537200-48541600 Weak transcription Esophagus oesophagus
47 chr13:48537200-48541800 Weak transcription HMEC breast
48 chr13:48537200-48543000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr13:48537200-48544800 Strong transcription Cortex derived primary cultured neurospheres brain
50 chr13:48537200-48574200 Weak transcription Colonic Mucosa Colon

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