The 2.0 version of rSNPBase

Variant report

Variant rs9534882
Chromosome Location chr13:48525776-48525777
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48501000-48531200 Weak transcription Spleen Spleen
2 chr13:48502000-48530800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr13:48506000-48531400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr13:48507200-48548800 Weak transcription Stomach Mucosa stomach
5 chr13:48507800-48530600 Weak transcription Brain Angular Gyrus brain
6 chr13:48508000-48531400 Weak transcription Rectal Smooth Muscle rectum
7 chr13:48508200-48529600 Weak transcription Brain Cingulate Gyrus brain
8 chr13:48508600-48530800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr13:48509000-48530800 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr13:48509200-48528400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr13:48511000-48530600 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr13:48511000-48536600 Weak transcription Esophagus oesophagus
13 chr13:48511800-48531200 Weak transcription HUVEC blood vessel
14 chr13:48512200-48530000 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr13:48512200-48530800 Weak transcription Colonic Mucosa Colon
16 chr13:48512200-48531200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr13:48512600-48527000 Weak transcription Pancreas Pancrea
18 chr13:48512600-48529400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr13:48512600-48530800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr13:48512600-48531400 Weak transcription Aorta Aorta
21 chr13:48512600-48537600 Weak transcription Hela-S3 cervix
22 chr13:48512800-48531200 Weak transcription Gastric stomach
23 chr13:48512800-48533800 Weak transcription NHLF lung
24 chr13:48513000-48530400 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr13:48513000-48531000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr13:48513600-48530000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr13:48514400-48574000 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr13:48515600-48527000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr13:48515800-48526200 Weak transcription Fetal Heart heart
30 chr13:48515800-48527000 Weak transcription Brain Hippocampus Middle brain
31 chr13:48516200-48531200 Weak transcription Brain Inferior Temporal Lobe brain
32 chr13:48516400-48529600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr13:48516800-48529200 Weak transcription Fetal Intestine Small intestine
34 chr13:48516800-48529400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr13:48517000-48530600 Weak transcription Stomach Smooth Muscle stomach
36 chr13:48517600-48527000 Weak transcription Colon Smooth Muscle Colon
37 chr13:48517800-48525800 Weak transcription Fetal Kidney kidney
38 chr13:48517800-48530400 Weak transcription HMEC breast
39 chr13:48519600-48528000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr13:48519600-48529400 Strong transcription Primary monocytes fromperipheralblood blood
41 chr13:48519600-48529600 Strong transcription Primary T helper cells fromperipheralblood blood
42 chr13:48519600-48530000 Strong transcription Dnd41 blood
43 chr13:48519600-48531200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr13:48519600-48533800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr13:48519800-48528800 Strong transcription Primary T cells fromperipheralblood blood
46 chr13:48519800-48529000 Strong transcription HUES6 Cell Line embryonic stem cell
47 chr13:48520000-48525800 Strong transcription HepG2 liver
48 chr13:48520000-48528400 Strong transcription iPS-18 Cell Line embryonic stem cell
49 chr13:48520000-48528800 Strong transcription Primary B cells from cord blood blood
50 chr13:48520000-48529200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015