Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:95312681..95313521-chr13:95640932..95641462,2	MCF-7	breast:
2	chr13:95640676..95641188-chr13:95808244..95809124,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11839175	1.00[EUR][1000 genomes]
rs11840606	1.00[EUR][1000 genomes]
rs11841559	1.00[EUR][1000 genomes]
rs11841597	1.00[EUR][1000 genomes]
rs11843668	1.00[EUR][1000 genomes]
rs1925854	1.00[EUR][1000 genomes]
rs6492760	1.00[EUR][1000 genomes]
rs73551609	1.00[EUR][1000 genomes]
rs73551612	1.00[EUR][1000 genomes]
rs73551620	1.00[EUR][1000 genomes]
rs73551628	1.00[EUR][1000 genomes]
rs73551633	1.00[EUR][1000 genomes]
rs73551636	1.00[EUR][1000 genomes]
rs73551639	1.00[EUR][1000 genomes]
rs73551640	1.00[EUR][1000 genomes]
rs73551643	1.00[EUR][1000 genomes]
rs73551645	1.00[EUR][1000 genomes]
rs73551647	1.00[EUR][1000 genomes]
rs73551665	1.00[EUR][1000 genomes]
rs73553608	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73553661	1.00[EUR][1000 genomes]
rs73553674	1.00[EUR][1000 genomes]
rs73553690	1.00[EUR][1000 genomes]
rs73557797	1.00[EUR][1000 genomes]
rs7981159	1.00[EUR][1000 genomes]
rs7982193	1.00[EUR][1000 genomes]
rs7996263	1.00[EUR][1000 genomes]
rs7998670	1.00[EUR][1000 genomes]
rs9584272	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832688	chr13:95633193-95780198	Flanking Bivalent TSS/Enh Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
2	esv2761812	chr13:95639780-95643937	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95637600-95645200	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr13:95638000-95644800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr13:95640800-95641400	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr13:95640800-95641400	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr13:95641000-95644400	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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