Variant report

Variant	rs11841559
Chromosome Location	chr13:95626618-95626619
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:95619254..95622585-chr13:95624903..95627476,4	K562	blood:

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs11839175	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11840606	1.00[EUR][1000 genomes]
rs11841597	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11843668	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1925854	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1925874	1.00[AMR][1000 genomes]
rs1925875	1.00[AMR][1000 genomes]
rs1925877	1.00[AMR][1000 genomes]
rs2182264	1.00[AMR][1000 genomes]
rs6492760	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551609	0.80[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551612	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551620	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551628	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551633	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551636	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551639	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551640	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551643	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551645	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551647	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551665	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73553608	1.00[EUR][1000 genomes]
rs73553615	1.00[EUR][1000 genomes]
rs73553661	1.00[EUR][1000 genomes]
rs73553674	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73553690	1.00[EUR][1000 genomes]
rs73557797	1.00[EUR][1000 genomes]
rs7981159	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7982193	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7996263	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7998670	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9524745	1.00[AMR][1000 genomes]
rs9584272	1.00[EUR][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95625600-95627000	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr13:95625600-95627200	Enhancers	Fetal Brain Female	brain
3	chr13:95625800-95626800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr13:95626000-95627000	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr13:95626000-95627600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr13:95626200-95627000	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr13:95626200-95627200	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr13:95626200-95627600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
9	chr13:95626200-95627800	Enhancers	iPS-20b Cell Line	embryonic stem cell
10	chr13:95626200-95627800	Enhancers	Fetal Brain Male	brain
11	chr13:95626400-95626800	Enhancers	ES-I3 Cell Line	embryonic stem cell
12	chr13:95626400-95627000	Enhancers	H1 Cell Line	embryonic stem cell
13	chr13:95626400-95627600	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr13:95626400-95627800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr13:95626600-95626800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr13:95626600-95627000	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr13:95626600-95627200	Enhancers	Brain Germinal Matrix	brain
18	chr13:95626600-95627400	Enhancers	Fetal Lung	lung

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