Variant report

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10219913	1.00[JPT][hapmap]
rs11839175	0.87[AMR][1000 genomes]
rs11841559	1.00[AMR][1000 genomes]
rs11841597	0.87[AMR][1000 genomes]
rs11843668	1.00[AMR][1000 genomes]
rs1925854	0.87[AMR][1000 genomes]
rs1925875	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1925877	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2182264	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6492758	0.85[AFR][1000 genomes]
rs6492760	0.87[AMR][1000 genomes]
rs73551609	0.87[AMR][1000 genomes]
rs73551612	0.87[AMR][1000 genomes]
rs73551620	0.87[AMR][1000 genomes]
rs73551628	0.87[AMR][1000 genomes]
rs73551633	0.87[AMR][1000 genomes]
rs73551636	1.00[AMR][1000 genomes]
rs73551639	0.87[AMR][1000 genomes]
rs73551640	1.00[AMR][1000 genomes]
rs73551643	1.00[AMR][1000 genomes]
rs73551645	1.00[AMR][1000 genomes]
rs73551647	0.87[AMR][1000 genomes]
rs73551665	1.00[AMR][1000 genomes]
rs73553674	0.89[AMR][1000 genomes]
rs7981159	1.00[AMR][1000 genomes]
rs7982193	1.00[AMR][1000 genomes]
rs7987195	0.85[AFR][1000 genomes]
rs7993878	1.00[JPT][hapmap]
rs7996263	0.87[AMR][1000 genomes]
rs7998670	0.87[AMR][1000 genomes]
rs9302040	1.00[JPT][hapmap]
rs9302042	1.00[JPT][hapmap]
rs9302043	1.00[JPT][hapmap]
rs9524745	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9556455	1.00[JPT][hapmap]
rs9561768	1.00[JPT][hapmap]
rs9561769	1.00[JPT][hapmap]
rs9590168	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832688	chr13:95633193-95780198	Flanking Bivalent TSS/Enh Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95635600-95636200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
2	chr13:95635600-95636200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
3	chr13:95635600-95636600	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr13:95635600-95637600	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr13:95635600-95637800	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chr13:95635800-95637000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr13:95635800-95637200	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr13:95635800-95637400	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr13:95635800-95637600	Enhancers	HUES48 Cell Line	embryonic stem cell
10	chr13:95635800-95637800	Enhancers	iPS-18 Cell Line	embryonic stem cell

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