Variant report

Variant	rs73551640
Chromosome Location	chr13:95622325-95622326
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:95619254..95622585-chr13:95624903..95627476,4	K562	blood:

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs11839175	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11840606	1.00[EUR][1000 genomes]
rs11841559	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11841597	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11843668	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1925854	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1925874	1.00[AMR][1000 genomes]
rs1925875	1.00[AMR][1000 genomes]
rs1925877	1.00[AMR][1000 genomes]
rs2182264	1.00[AMR][1000 genomes]
rs6492760	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551609	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551612	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551620	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551628	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551633	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551636	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551639	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551643	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551645	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551647	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73551665	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73553608	1.00[EUR][1000 genomes]
rs73553615	1.00[EUR][1000 genomes]
rs73553661	1.00[EUR][1000 genomes]
rs73553674	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73553690	1.00[EUR][1000 genomes]
rs73557797	1.00[EUR][1000 genomes]
rs7981159	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7982193	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7996263	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7998670	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9524745	1.00[AMR][1000 genomes]
rs9584272	1.00[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95621200-95626400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr13:95621400-95624000	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr13:95621400-95625600	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr13:95621600-95622400	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
5	chr13:95621600-95622600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
6	chr13:95621600-95625800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr13:95621800-95622800	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr13:95621800-95623000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr13:95621800-95624200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr13:95622000-95622400	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr13:95622000-95623000	Enhancers	iPS-20b Cell Line	embryonic stem cell
12	chr13:95622200-95622400	Enhancers	ES-I3 Cell Line	embryonic stem cell
13	chr13:95622200-95624000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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