Variant report

Variant	rs73568386
Chromosome Location	chr6:145945641-145945642
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs4566900	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56954340	1.00[EUR][1000 genomes]
rs57057101	1.00[EUR][1000 genomes]
rs58290238	1.00[EUR][1000 genomes]
rs60698481	1.00[EUR][1000 genomes]
rs60899243	1.00[EUR][1000 genomes]
rs6570725	1.00[EUR][1000 genomes]
rs6570727	1.00[EUR][1000 genomes]
rs6899864	1.00[EUR][1000 genomes]
rs6900565	1.00[EUR][1000 genomes]
rs6918314	1.00[EUR][1000 genomes]
rs6920565	1.00[EUR][1000 genomes]
rs6938895	1.00[EUR][1000 genomes]
rs6940256	1.00[EUR][1000 genomes]
rs73559143	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73559156	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73560914	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73566143	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73568401	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73570006	1.00[EUR][1000 genomes]
rs73570010	1.00[EUR][1000 genomes]
rs73570033	1.00[EUR][1000 genomes]
rs73570037	1.00[EUR][1000 genomes]
rs73570042	1.00[EUR][1000 genomes]
rs73572161	1.00[EUR][1000 genomes]
rs73572189	1.00[EUR][1000 genomes]
rs73574105	1.00[EUR][1000 genomes]
rs73576133	1.00[EUR][1000 genomes]
rs7748474	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7757256	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:145924400-145948200	Weak transcription	Left Ventricle	heart
2	chr6:145934200-145948000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr6:145937600-145952000	Weak transcription	Psoas Muscle	Psoas
4	chr6:145939800-145948400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr6:145941600-145954200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr6:145942400-145955400	Weak transcription	Esophagus	oesophagus
7	chr6:145943200-145947800	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr6:145943200-145948200	Weak transcription	Fetal Stomach	stomach
9	chr6:145943200-145948200	Weak transcription	Pancreas	Pancrea
10	chr6:145943600-145947600	Weak transcription	Primary B cells from peripheral blood	blood
11	chr6:145943600-145948400	Weak transcription	Brain Hippocampus Middle	brain
12	chr6:145943800-145948200	Weak transcription	Right Ventricle	heart
13	chr6:145944200-145949800	Weak transcription	GM12878-XiMat	blood
14	chr6:145944400-145948000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr6:145945000-145948200	Weak transcription	Aorta	Aorta
16	chr6:145945200-145946800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
17	chr6:145945200-145950200	Weak transcription	Primary B cells from cord blood	blood
18	chr6:145945200-145955400	Weak transcription	Fetal Muscle Leg	muscle
19	chr6:145945400-145948200	Weak transcription	Thymus	Thymus
20	chr6:145945400-145949000	Enhancers	Primary neutrophils fromperipheralblood	blood
21	chr6:145945600-145947800	Weak transcription	Brain Anterior Caudate	brain
22	chr6:145945600-145948000	Weak transcription	Brain Substantia Nigra	brain
23	chr6:145945600-145948000	Weak transcription	Skeletal Muscle Female	skeletal muscle

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