Variant report
| Variant | rs73580425 |
|---|---|
| Chromosome Location | chr6:142675164-142675165 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:142654800-142676600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 2 | chr6:142657400-142678800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 3 | chr6:142663400-142676400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 4 | chr6:142665600-142680200 | Weak transcription | HUVEC | blood vessel |
| 5 | chr6:142666000-142677000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 6 | chr6:142670600-142676200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 7 | chr6:142670800-142676600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 8 | chr6:142670800-142676600 | Weak transcription | Thymus | Thymus |
| 9 | chr6:142671400-142679400 | Weak transcription | Liver | Liver |
| 10 | chr6:142672600-142676600 | Strong transcription | HepG2 | liver |
| 11 | chr6:142672600-142680800 | Weak transcription | Fetal Brain Male | brain |
| 12 | chr6:142674400-142678000 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 13 | chr6:142674600-142675200 | Enhancers | Brain Angular Gyrus | brain |
| 14 | chr6:142674600-142676600 | Enhancers | A549 | lung |
| 15 | chr6:142674800-142676600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 16 | chr6:142674800-142680400 | Enhancers | Fetal Lung | lung |
| 17 | chr6:142675000-142675800 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 18 | chr6:142675000-142676000 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
