The 2.0 version of rSNPBase

Variant report

Variant rs73580457
Chromosome Location chr6:142721405-142721406
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:142698600-142733200 Weak transcription Placenta Amnion Placenta Amnion
2 chr6:142708000-142734800 Weak transcription Esophagus oesophagus
3 chr6:142710000-142721600 Weak transcription NHLF lung
4 chr6:142710200-142733400 Weak transcription HSMM muscle
5 chr6:142711400-142725000 Strong transcription HepG2 liver
6 chr6:142711800-142725200 Strong transcription Liver Liver
7 chr6:142712200-142735000 Weak transcription Fetal Brain Male brain
8 chr6:142714200-142733200 Weak transcription HMEC breast
9 chr6:142717200-142721600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr6:142717600-142721600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr6:142717600-142721600 Weak transcription Muscle Satellite Cultured Cells --
12 chr6:142717600-142724600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr6:142717600-142725800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr6:142718000-142721600 Weak transcription Primary hematopoietic stem cells blood
15 chr6:142718000-142763200 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr6:142718200-142721600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr6:142718400-142722400 Strong transcription Fetal Lung lung
18 chr6:142718600-142724000 Strong transcription Placenta Placenta
19 chr6:142719200-142722600 Strong transcription A549 lung
20 chr6:142719800-142722000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr6:142719800-142735400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr6:142720000-142721600 Weak transcription Fetal Heart heart
23 chr6:142720400-142725000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr6:142720400-142733200 Weak transcription NHEK skin
25 chr6:142720600-142721600 Weak transcription Duodenum Mucosa Duodenum
26 chr6:142720600-142736800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr6:142720800-142722400 Enhancers HUES64 Cell Line embryonic stem cell
28 chr6:142721000-142721800 Weak transcription Primary T cells from cord blood blood
29 chr6:142721000-142722200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr6:142721000-142722200 Enhancers iPS-15b Cell Line embryonic stem cell
31 chr6:142721000-142722400 Enhancers ES-I3 Cell Line embryonic stem cell
32 chr6:142721000-142722400 Enhancers ES-WA7 Cell Line embryonic stem cell
33 chr6:142721000-142722400 Enhancers HUES6 Cell Line embryonic stem cell
34 chr6:142721000-142723000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr6:142721000-142723200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr6:142721000-142723200 Enhancers Fetal Intestine Small intestine
37 chr6:142721200-142721600 Weak transcription Stomach Mucosa stomach
38 chr6:142721200-142721600 Enhancers HUVEC blood vessel
39 chr6:142721200-142722400 Enhancers HUES48 Cell Line embryonic stem cell
40 chr6:142721200-142722400 Enhancers iPS-20b Cell Line embryonic stem cell
41 chr6:142721400-142722400 Enhancers NH-A brain
42 chr6:142721400-142722600 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015