The 2.0 version of rSNPBase

Variant report

Variant rs73580473
Chromosome Location chr6:142739828-142739829
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:142718000-142763200 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr6:142721600-142749200 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr6:142722000-142743400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr6:142727000-142743400 Strong transcription HepG2 liver
5 chr6:142729200-142743200 Strong transcription Liver Liver
6 chr6:142730200-142747600 Weak transcription Fetal Intestine Small intestine
7 chr6:142733800-142758000 Weak transcription Stomach Smooth Muscle stomach
8 chr6:142734800-142743200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr6:142735200-142760200 Weak transcription Esophagus oesophagus
10 chr6:142735200-142765400 Weak transcription Hela-S3 cervix
11 chr6:142735600-142743600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr6:142735800-142740200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr6:142735800-142765400 Weak transcription Placenta Amnion Placenta Amnion
14 chr6:142736800-142743200 Strong transcription Placenta Placenta
15 chr6:142737400-142742200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr6:142737600-142741000 Weak transcription Fetal Intestine Large intestine
17 chr6:142737600-142765600 Weak transcription Duodenum Mucosa Duodenum
18 chr6:142737800-142765800 Weak transcription Fetal Brain Male brain
19 chr6:142738000-142740200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr6:142738000-142774200 Weak transcription NHEK skin
21 chr6:142738200-142741200 Weak transcription HMEC breast
22 chr6:142738200-142743200 Strong transcription Primary hematopoietic stem cells blood
23 chr6:142738400-142741400 Strong transcription A549 lung
24 chr6:142738400-142741600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr6:142738600-142740000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr6:142738600-142742200 Strong transcription HUVEC blood vessel
27 chr6:142738600-142742800 Weak transcription NHDF-Ad bronchial
28 chr6:142738800-142742000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr6:142738800-142743400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr6:142738800-142749600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr6:142739000-142740200 Weak transcription Fetal Lung lung
32 chr6:142739000-142741000 Weak transcription HSMM muscle
33 chr6:142739000-142741400 Weak transcription HSMMtube muscle
34 chr6:142739000-142741600 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr6:142739000-142742000 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr6:142739000-142742200 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr6:142739000-142764800 Weak transcription NHLF lung
38 chr6:142739200-142741800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr6:142739200-142742000 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr6:142739200-142742000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr6:142739200-142742000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr6:142739200-142742400 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr6:142739200-142742400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr6:142739200-142742600 Weak transcription Osteobl bone

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Last update: Aug 31, 2015