Variant report

Variant	rs73583818
Chromosome Location	chr11:101123743-101123744
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10466630	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10466631	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10466632	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10466633	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11224622	1.00[AMR][1000 genomes]
rs11224623	1.00[AMR][1000 genomes]
rs11224644	1.00[AMR][1000 genomes]
rs12270775	1.00[AMR][1000 genomes]
rs12279240	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12280167	1.00[AMR][1000 genomes]
rs12281137	1.00[AMR][1000 genomes]
rs12284507	1.00[AMR][1000 genomes]
rs12287094	1.00[AMR][1000 genomes]
rs12289458	1.00[AMR][1000 genomes]
rs60766012	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73579728	1.00[AMR][1000 genomes]
rs73583806	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv556131	chr11:100985777-101480017	Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
2	nsv530644	chr11:101010088-101486038	Strong transcription Weak transcription Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	esv2753322	chr11:101052790-101311790	Flanking Bivalent TSS/Enh Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv832247	chr11:101123483-101298787	Bivalent Enhancer ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:101116600-101125800	Weak transcription	Ovary	ovary

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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