Variant report

Variant	rs73584182
Chromosome Location	chr8:35746456-35746457
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs55941225	1.00[AMR][1000 genomes]
rs56114419	1.00[AMR][1000 genomes]
rs56205736	0.83[AFR][1000 genomes]
rs56274851	1.00[AMR][1000 genomes]
rs56770122	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56808431	1.00[AMR][1000 genomes]
rs56860408	0.85[AMR][1000 genomes]
rs57176697	1.00[AMR][1000 genomes]
rs57529054	1.00[AMR][1000 genomes]
rs57718380	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58468407	0.85[AMR][1000 genomes]
rs59081997	1.00[AMR][1000 genomes]
rs59424516	1.00[AMR][1000 genomes]
rs59650242	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60045242	1.00[AMR][1000 genomes]
rs60257165	1.00[AMR][1000 genomes]
rs60455013	1.00[AMR][1000 genomes]
rs60855337	1.00[AMR][1000 genomes]
rs61067704	1.00[AMR][1000 genomes]
rs61113233	1.00[AMR][1000 genomes]
rs61397641	0.83[AMR][1000 genomes]
rs61520251	1.00[AMR][1000 genomes]
rs73576270	1.00[AMR][1000 genomes]
rs73578265	0.85[AMR][1000 genomes]
rs73578267	0.85[AMR][1000 genomes]
rs73578270	0.85[AMR][1000 genomes]
rs73578285	0.85[AMR][1000 genomes]
rs73582210	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73584129	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73584131	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73584169	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73586705	1.00[AMR][1000 genomes]
rs73586711	0.85[AMR][1000 genomes]
rs73586719	1.00[AMR][1000 genomes]
rs73673924	0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533420	chr8:35358115-36227536	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv1032540	chr8:35565491-35949132	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1024552	chr8:35655964-36210907	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
4	nsv539548	chr8:35655964-36210907	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
5	esv2761421	chr8:35744018-35766773	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:35744200-35747400	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr8:35745000-35747400	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr8:35745200-35747200	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr8:35746000-35746600	Enhancers	iPS-20b Cell Line	embryonic stem cell
5	chr8:35746400-35747800	Enhancers	HUES48 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links