Variant report

Variant	rs73584199
Chromosome Location	chr8:35759750-35759751
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs57288936	1.00[AMR][1000 genomes]
rs58984544	1.00[AMR][1000 genomes]
rs73576363	1.00[AMR][1000 genomes]
rs73584201	1.00[AMR][1000 genomes]
rs73586104	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73586106	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73586109	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73586115	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73586166	1.00[AMR][1000 genomes]
rs73586169	1.00[AMR][1000 genomes]
rs73586179	1.00[AMR][1000 genomes]
rs73586181	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533420	chr8:35358115-36227536	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv1032540	chr8:35565491-35949132	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1024552	chr8:35655964-36210907	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
4	nsv539548	chr8:35655964-36210907	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
5	esv2761421	chr8:35744018-35766773	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:35758800-35760000	Weak transcription	Primary B cells from cord blood	blood
2	chr8:35758800-35760400	Enhancers	Fetal Intestine Large	intestine
3	chr8:35759000-35760600	Weak transcription	Primary B cells from peripheral blood	blood
4	chr8:35759400-35760400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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