Variant report

rSNPs within LD-proxies of this variant (count:36)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533420	chr8:35358115-36227536	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv1032540	chr8:35565491-35949132	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1024552	chr8:35655964-36210907	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
4	nsv539548	chr8:35655964-36210907	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:35796800-35798200	Enhancers	Brain Germinal Matrix	brain
2	chr8:35796800-35798400	Enhancers	Rectal Smooth Muscle	rectum
3	chr8:35796800-35799200	Enhancers	Cortex derived primary cultured neurospheres	brain
4	chr8:35797000-35798600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
5	chr8:35797000-35798800	Enhancers	Brain Cingulate Gyrus	brain
6	chr8:35797200-35798000	Enhancers	Adipose Nuclei	Adipose
7	chr8:35797200-35798000	Enhancers	Brain Inferior Temporal Lobe	brain
8	chr8:35797200-35798000	Enhancers	Right Atrium	heart
9	chr8:35797200-35798200	Enhancers	Brain Anterior Caudate	brain
10	chr8:35797200-35798400	Enhancers	Brain Angular Gyrus	brain
11	chr8:35797200-35800000	Enhancers	Muscle Satellite Cultured Cells	--
12	chr8:35797400-35798200	Enhancers	Breast Myoepithelial Primary Cells	Breast
13	chr8:35797400-35798200	Enhancers	Rectal Mucosa Donor 29	rectum
14	chr8:35797400-35798600	Enhancers	Fetal Intestine Small	intestine
15	chr8:35797400-35800800	Weak transcription	Brain Hippocampus Middle	brain
16	chr8:35797600-35797800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr8:35797600-35798000	Flanking Active TSS	Colon Smooth Muscle	Colon
18	chr8:35797600-35798000	Active TSS	Pancreatic Islets	Pancreatic Islet
19	chr8:35797600-35798400	Enhancers	iPS-18 Cell Line	embryonic stem cell
20	chr8:35797600-35798600	Enhancers	Fetal Lung	lung

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