Variant report

Variant	rs73586104
Chromosome Location	chr8:35766914-35766915
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs57288936	1.00[AMR][1000 genomes]
rs58984544	1.00[AMR][1000 genomes]
rs73576363	1.00[AMR][1000 genomes]
rs73584199	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73584201	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73586106	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73586109	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73586115	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73586166	1.00[AMR][1000 genomes]
rs73586169	1.00[AMR][1000 genomes]
rs73586179	1.00[AMR][1000 genomes]
rs73586181	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533420	chr8:35358115-36227536	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv1032540	chr8:35565491-35949132	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1024552	chr8:35655964-36210907	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
4	nsv539548	chr8:35655964-36210907	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:35763200-35770200	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr8:35764800-35772400	Weak transcription	Fetal Intestine Small	intestine
3	chr8:35766200-35767800	Enhancers	Primary B cells from cord blood	blood
4	chr8:35766400-35767800	Enhancers	Primary B cells from peripheral blood	blood
5	chr8:35766400-35767800	Enhancers	Dnd41	blood
6	chr8:35766400-35768000	Enhancers	Fetal Intestine Large	intestine
7	chr8:35766600-35768000	Enhancers	Breast Myoepithelial Primary Cells	Breast

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links