Variant report

Variant	rs73590779
Chromosome Location	chr10:4374034-4374035
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs11252407	1.00[EUR][1000 genomes]
rs11252427	1.00[EUR][1000 genomes]
rs11252428	1.00[EUR][1000 genomes]
rs11815588	1.00[EUR][1000 genomes]
rs11819395	1.00[EUR][1000 genomes]
rs12246351	1.00[EUR][1000 genomes]
rs12250485	1.00[EUR][1000 genomes]
rs12266164	1.00[EUR][1000 genomes]
rs1616203	1.00[EUR][1000 genomes]
rs1679445	1.00[EUR][1000 genomes]
rs1679453	1.00[EUR][1000 genomes]
rs1923398	1.00[EUR][1000 genomes]
rs4142671	1.00[EUR][1000 genomes]
rs55880712	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60543757	1.00[EUR][1000 genomes]
rs7087506	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7097687	1.00[EUR][1000 genomes]
rs7098580	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73590778	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73590787	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73590789	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73592723	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74114737	1.00[EUR][1000 genomes]
rs7903376	1.00[EUR][1000 genomes]
rs7913017	1.00[EUR][1000 genomes]
rs7919733	1.00[EUR][1000 genomes]
rs7920841	1.00[EUR][1000 genomes]
rs7924147	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3324027	chr10:4373852-4378450	Weak transcription Enhancers Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4371200-4374400	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr10:4371800-4374200	Enhancers	NHEK	skin
3	chr10:4372600-4377400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr10:4373200-4374200	Enhancers	Hela-S3	cervix
5	chr10:4373400-4374200	Enhancers	Left Ventricle	heart
6	chr10:4373400-4374200	Enhancers	HMEC	breast
7	chr10:4373600-4377000	Weak transcription	Right Atrium	heart
8	chr10:4374000-4374200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr10:4374000-4377200	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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