Variant report

Variant	rs73650630
Chromosome Location	chr9:13757907-13757908
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10961223	1.00[AFR][1000 genomes]
rs12002489	1.00[EUR][1000 genomes]
rs12005535	1.00[EUR][1000 genomes]
rs16930920	1.00[EUR][1000 genomes]
rs528841	1.00[EUR][1000 genomes]
rs55716496	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs56145825	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs56166354	1.00[EUR][1000 genomes]
rs56874646	1.00[AFR][1000 genomes]
rs57153569	1.00[EUR][1000 genomes]
rs591153	1.00[EUR][1000 genomes]
rs59355338	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs59592609	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs598697	1.00[EUR][1000 genomes]
rs666487	1.00[EUR][1000 genomes]
rs7025657	1.00[EUR][1000 genomes]
rs73416910	1.00[EUR][1000 genomes]
rs73647698	1.00[AFR][1000 genomes]
rs73647702	1.00[AFR][1000 genomes]
rs73648007	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73650632	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73650634	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73650635	1.00[AFR][1000 genomes]
rs73650637	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv892590	chr9:13689066-13777299	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv1022001	chr9:13717736-13983738	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1032702	chr9:13723812-13760986	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:13750800-13758800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr9:13751000-13758800	Weak transcription	HSMM	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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