Variant report

Variant	rs7368977
Chromosome Location	chr2:113558384-113558385
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10210810	0.98[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs11687733	0.95[AFR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12711742	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12989407	1.00[ASN][1000 genomes]
rs17597976	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2048874	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35938455	1.00[ASN][1000 genomes]
rs41294736	1.00[ASN][1000 genomes]
rs62158651	1.00[ASN][1000 genomes]
rs6542097	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7567467	0.87[EUR][1000 genomes]
rs7599171	0.81[AFR][1000 genomes];0.87[EUR][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:113542400-113559200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr2:113543000-113562200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr2:113552800-113560800	Weak transcription	Osteobl	bone
4	chr2:113553600-113559000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr2:113553600-113559000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr2:113553600-113561200	Weak transcription	K562	blood
7	chr2:113553600-113562800	Weak transcription	Esophagus	oesophagus
8	chr2:113553800-113558400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr2:113553800-113559200	Weak transcription	Hela-S3	cervix
10	chr2:113553800-113563000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr2:113554400-113558800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr2:113555600-113563200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr2:113556200-113558600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr2:113557400-113558800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr2:113557400-113559000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr2:113557400-113560600	Weak transcription	HMEC	breast
17	chr2:113557400-113560600	Weak transcription	NHEK	skin
18	chr2:113558000-113558400	Weak transcription	GM12878-XiMat	blood
19	chr2:113558200-113559000	Enhancers	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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