Variant report

Variant	rs73691687
Chromosome Location	chr8:78319667-78319668
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs16919474	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16939481	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16939483	1.00[AMR][1000 genomes]
rs56177095	1.00[AMR][1000 genomes]
rs56386822	1.00[AMR][1000 genomes]
rs56766898	1.00[AMR][1000 genomes]
rs58927140	1.00[AMR][1000 genomes]
rs59757211	1.00[AMR][1000 genomes]
rs72435768	1.00[AMR][1000 genomes]
rs73691374	1.00[AMR][1000 genomes]
rs73691629	1.00[AMR][1000 genomes]
rs73691630	1.00[AMR][1000 genomes]
rs73691674	1.00[AMR][1000 genomes]
rs73691675	1.00[AMR][1000 genomes]
rs73691684	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73691688	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73693504	1.00[AMR][1000 genomes]
rs73693525	1.00[AMR][1000 genomes]
rs73693556	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891045	chr8:77998659-78477561	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv891047	chr8:78265312-78322329	Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv891048	chr8:78271372-78322329	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:78319400-78319800	Enhancers	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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