Variant report

Variant	rs73691688
Chromosome Location	chr8:78323720-78323721
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs16919474	1.00[AMR][1000 genomes]
rs16939481	1.00[AMR][1000 genomes]
rs16939483	1.00[AMR][1000 genomes]
rs56177095	1.00[AMR][1000 genomes]
rs56386822	1.00[AMR][1000 genomes]
rs56766898	1.00[AMR][1000 genomes]
rs58927140	1.00[AMR][1000 genomes]
rs59757211	1.00[AMR][1000 genomes]
rs72435768	1.00[AMR][1000 genomes]
rs73691374	1.00[AMR][1000 genomes]
rs73691629	1.00[AMR][1000 genomes]
rs73691630	1.00[AMR][1000 genomes]
rs73691674	1.00[AMR][1000 genomes]
rs73691675	1.00[AMR][1000 genomes]
rs73691684	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73691687	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73693504	1.00[AMR][1000 genomes]
rs73693525	1.00[AMR][1000 genomes]
rs73693556	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891045	chr8:77998659-78477561	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:78323000-78323800	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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